verilylifesciences / genomewarpLinks
GenomeWarp translates genetic variants from one genome assembly version to another.
☆97Updated 2 years ago
Alternatives and similar repositories for genomewarp
Users that are interested in genomewarp are comparing it to the libraries listed below
Sorting:
- Scalable gVCF merging and joint variant calling for population sequencing projects☆168Updated last year
- ncbi-vdb☆92Updated this week
- NGS Language Bindings☆119Updated last year
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆99Updated 2 years ago
- De novo assembly based variant calling pipeline for Illumina short reads☆108Updated 4 years ago
- Population-scale genotyping using pangenome graphs☆190Updated 8 months ago
- VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.☆99Updated last year
- De novo genome assembly and multisample variant calling☆112Updated 6 years ago
- Genome inference from a population reference graph☆96Updated 5 months ago
- FALCON-Phase integrates PacBio long-read assemblies with Phase Genomics Hi-C data to create phased, diploid, chromosome-scale scaffolds☆74Updated 4 years ago
- 🌈Scaffold genome sequence assemblies using linked or long read sequencing data☆95Updated 10 months ago
- ☆107Updated 2 weeks ago
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆89Updated 11 months ago
- This repository contains information about latest release from Genome in a Bottle project☆75Updated 6 years ago
- simuG: a general-purpose genome simulator☆96Updated 3 months ago
- Scripts, utilities and programs for genomic bioinformatics.☆83Updated 3 weeks ago
- Implementation of Positional Burrows-Wheeler Transform for genetic data☆110Updated 6 months ago
- Flexible genotype query among 30,000+ samples whole-genome☆94Updated 6 years ago
- Platypus Variant Caller☆108Updated last year
- Tools for the analysis of structural variation in genomes☆81Updated last year
- Human Pangenome Reference Consortium - HG002 Data Freeze (v1.0)☆80Updated 3 years ago
- A method for variant graph genotyping based on exact alignment of k-mers☆86Updated 6 years ago
- Ancestry and Kinship Tools☆70Updated 2 years ago
- A genotype query interface.☆136Updated 4 years ago
- Tools for early stage alignment file processing☆95Updated 6 years ago
- ☆82Updated 6 years ago
- utilities for indexing and sequence extraction from FASTA files☆59Updated 4 years ago
- The Platinum Genomes Truthset☆88Updated 7 years ago
- A C++ header-only library for reading Oxford Nanopore Fast5 files☆53Updated 3 years ago
- ☆118Updated last year