jgurtowski / nanocorrLinks
Error correction for Oxford Nanopore data
☆47Updated 4 years ago
Alternatives and similar repositories for nanocorr
Users that are interested in nanocorr are comparing it to the libraries listed below
Sorting:
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆46Updated 3 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆74Updated 8 years ago
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆56Updated 2 years ago
- Experimental pipeline for correcting nanopore reads☆39Updated 8 years ago
- Various scripts and recipes for working with nanopore data☆34Updated 9 years ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆57Updated 4 years ago
- UCSC Nanopore☆43Updated 5 years ago
- Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.☆47Updated 4 years ago
- Manipulate FASTA files☆30Updated 10 years ago
- Analysis tool for Nanopore sequencing data☆33Updated 6 years ago
- ☆26Updated 5 years ago
- Merge transcriptome assemblies☆31Updated 8 years ago
- Synteny Imager☆62Updated 9 months ago
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆30Updated 4 years ago
- High-performance error correction for Illumina resequencing data☆71Updated 9 years ago
- PacBio hybrid error correction through iterative short read consensus☆61Updated 6 years ago
- A draft genome scaffolder that uses multiple reference genomes in a graph-based approach.☆44Updated 4 years ago
- Using kallisto for metagenomic analysis☆50Updated 8 years ago
- finshingTool☆55Updated 8 years ago
- ☆44Updated 8 years ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆55Updated last year
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 5 years ago
- A tool for Racon polishing of miniasm assemblies☆75Updated this week
- ☆17Updated 7 years ago
- Visualize whole genome alignments as linear maps☆72Updated 8 months ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Scripts for implementing read until and other examples.☆31Updated 5 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 7 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆67Updated 7 years ago