ginkgobioworks / edgeLinks
Efficiently keep track of changes to genomes
☆38Updated last year
Alternatives and similar repositories for edge
Users that are interested in edge are comparing it to the libraries listed below
Sorting:
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆45Updated 7 months ago
- A python wrapper for the benchling api☆50Updated 5 years ago
- Example usage of the Benchling API: https://docs.benchling.com/☆35Updated 6 months ago
- 🎨 Python library to plot multi-part genetic constructs☆25Updated 8 months ago
- repository-based plasmid design☆29Updated 3 years ago
- A route planner for DNA assembly☆36Updated 7 months ago
- Easily download genomes and build BLAST/Bowtie indexes in Python☆22Updated 3 years ago
- Find common blocks and differences between DNA sequences☆42Updated last month
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.☆33Updated 8 months ago
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆64Updated 7 months ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆46Updated 9 years ago
- 💫 Computer-aided DNA assembly validation and identification from restriction digests.☆15Updated 7 months ago
- 🎺 Plot DNA digestion band patterns with Python☆20Updated 7 months ago
- General low-level API☆50Updated 3 years ago
- A pure Python implementation of the SBOL standard.☆22Updated 10 months ago
- Python interface to amino acid properties and IEDB☆57Updated last year
- Coral, a library and framework for specifying synthetic biology design processes.☆33Updated 3 years ago
- A Python package for Biopython that gives feature annotations from GenBank records a new and better life☆14Updated 9 years ago
- Read DNA sequences from colourful Microsoft Word documents☆34Updated 7 months ago
- A Python interface to the Ensembl REST APIs, biological data at your fingertips.☆11Updated last year
- Efficient handling of FASTQ files from Python☆51Updated last month
- A BioJS viewer for protein sequence features☆52Updated 3 years ago
- A tool for computing the coding potential of RNA transcript sequences using deep learning classification model☆57Updated 3 years ago
- biotoolsregistry: discovery portal for bioinformatics☆81Updated last week
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated 4 years ago
- Codon usage tables in code-friendly format + Python bindings☆42Updated 7 months ago
- Library for manipulating genomic variants and predicting their effects☆85Updated last year
- A python library for creating simulated regulatory DNA sequences☆39Updated 2 years ago
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 5 months ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆35Updated 2 years ago