ginkgobioworks / edge
Efficiently keep track of changes to genomes
☆38Updated 7 months ago
Alternatives and similar repositories for edge:
Users that are interested in edge are comparing it to the libraries listed below
- 🎨 Python library to plot multi-part genetic constructs☆25Updated last year
- repository-based plasmid design☆28Updated 2 years ago
- General low-level API☆49Updated 2 years ago
- A pure Python implementation of the SBOL standard.☆21Updated last month
- A python wrapper for the benchling api☆50Updated 4 years ago
- Example usage of the Benchling API: https://docs.benchling.com/☆31Updated last year
- Find common blocks and differences between DNA sequences☆40Updated 2 years ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆40Updated 8 years ago
- Coral, a library and framework for specifying synthetic biology design processes.☆33Updated 2 years ago
- DNA overhang misannealing data for Python☆13Updated 2 years ago
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.☆33Updated 2 years ago
- A Python wrapper around Clustal Omega (http://www.clustal.org/omega/)☆22Updated 3 years ago
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆43Updated 5 months ago
- A route planner for DNA assembly☆31Updated this week
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 7 months ago
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆55Updated last year
- 🎺 Plot DNA digestion band patterns with Python☆19Updated 2 years ago
- Python Implementation of Codon Adaption Index☆36Updated 2 years ago
- Codon usage tables in code-friendly format + Python bindings☆35Updated last month
- A BioJS viewer for protein sequence features☆49Updated 2 years ago
- 💫 Computer-aided DNA assembly validation and identification from restriction digests.☆15Updated 2 years ago
- Easily download genomes and build BLAST/Bowtie indexes in Python☆21Updated 2 years ago
- Native python implementation of SBOL 3.0 specification☆39Updated this week
- A Python package for Biopython that gives feature annotations from GenBank records a new and better life☆14Updated 8 years ago
- Draw genetic elements with HTML & CSS☆16Updated 8 years ago
- Synthego ICE - Inference of CRISPR Editing software☆67Updated last year
- Explore biomolecular pathways in Reactome from the command-line or a Python script☆22Updated 5 months ago
- A Python library for interacting with the Galaxy API☆90Updated last week
- A repository for the GenGraph toolkit for the creation and manipulation of graph genomes☆51Updated 3 years ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆67Updated 3 years ago