abiswas-odu / DiscoLinks
Multi-threaded Distributed Memory Overlap-Layout-Consensus (OLC) Metagenome Assembler
☆24Updated 6 years ago
Alternatives and similar repositories for Disco
Users that are interested in Disco are comparing it to the libraries listed below
Sorting:
- A gene-targeted assembler tool☆19Updated 7 years ago
- read cloud assembler☆36Updated 6 years ago
- StriDe Assembler☆25Updated 7 years ago
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆47Updated 6 years ago
- An automated assembly pipeline for microbial genomes☆17Updated last week
- Graph-based mapping of long sequences, noisy or HiFi.☆55Updated 4 years ago
- tools for error correction and working with long read data☆44Updated 10 years ago
- Find Unique genomic Regions☆30Updated 3 months ago
- Partitioning and analysis methods for large, complex sequence datasets☆38Updated 6 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- A toolkit for annotation of transposable element families from unassembled sequence reads☆30Updated 2 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆46Updated 3 years ago
- Convert genbank files to a swath of other formats☆18Updated last year
- Graph based multi genome aligner☆47Updated 3 years ago
- Minor Variant Calling and Phasing Tools☆15Updated 3 years ago
- A draft genome scaffolder that uses multiple reference genomes in a graph-based approach.☆44Updated 4 years ago
- ☆31Updated last year
- A Bayesian method for doing transcriptome assembly from RNA-seq data☆25Updated 10 years ago
- This repository is deprecated, please use the link to the right.☆23Updated 6 years ago
- Scaffolding genomes using synthetic long read clouds☆20Updated 8 years ago
- Rapid competitive read demulitplexer. Made with tries.☆23Updated 2 months ago
- Quantifying the significance of genetic variation using probabilistic profile-based methods.☆19Updated 4 years ago
- Estimating k-mer coverage histogram of genomics data☆77Updated last year
- MIRA sequence assembler☆29Updated 6 months ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 6 years ago
- MetaPathways v2.0: A master-worker model for environmental Pathway/Genome Database construction on grids and clouds☆33Updated 9 years ago
- REINDEER REad Index for abuNDancE quERy☆58Updated 2 weeks ago
- adds sample names and read-group (RG) tags to BAM alignments☆51Updated 4 years ago
- Reference-free variant discovery in large eukaryotic genomes☆41Updated 4 years ago
- A method of assessing sequence complexity based on kmer frequencies☆32Updated 7 years ago