rMETL - realignment-based Mobile Element insertion detection Tool for Long read
☆21Aug 13, 2024Updated last year
Alternatives and similar repositories for rMETL
Users that are interested in rMETL are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Jan 23, 2020Updated 6 years ago
- Long read based human genomic structural variation detection with cuteSV☆286Mar 26, 2026Updated last month
- ☆12Sep 11, 2025Updated 7 months ago
- Gene copy number prediction from k-mer frequencies☆16Apr 15, 2026Updated 3 weeks ago
- ☆15Apr 2, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Call regions of homozygosity and make tentative UPD calls☆12Jun 27, 2025Updated 10 months ago
- ☆31Nov 25, 2019Updated 6 years ago
- Public Benchmark of Long-Read Structural Variant Caller on ONT PromethION Data☆14Nov 28, 2019Updated 6 years ago
- TreeBeST: Tree Building guided by Species Tree☆14Feb 17, 2011Updated 15 years ago
- ☆10Jun 9, 2020Updated 5 years ago
- An innovative GWAS procedure for studies on germplasm population and plant breeding☆14Nov 16, 2020Updated 5 years ago
- R语言代谢组学数据分析☆12Feb 29, 2016Updated 10 years ago
- R package and wrapper functions for identifying serial structural variations from genome assemblies☆29Sep 21, 2024Updated last year
- Genomics datastructures using Apache Arrow☆21Nov 19, 2020Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆16Feb 26, 2026Updated 2 months ago
- The Genome U-Plot is a JavaScript tool to visualize chromosomal abnormalities in the Human Genome using a U-shape layout.☆32Dec 10, 2022Updated 3 years ago
- A mosaic genome painting tool for plant genomes☆18Updated this week
- Index and query k-mer matrices in BGZF☆12Apr 30, 2018Updated 8 years ago
- Add multiple thread function for genome comparison☆16Sep 29, 2021Updated 4 years ago
- Copy number variation detection using NGS data.☆21Oct 26, 2023Updated 2 years ago
- ☆51Aug 27, 2019Updated 6 years ago
- genotyping by Mapping-free ALternate-allele detection of known VAriants☆10Mar 6, 2023Updated 3 years ago
- A command line tool to compute mapping statistics from a BAM file☆25Mar 7, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆27Apr 17, 2026Updated 3 weeks ago
- Pacbio sequence alignment tool, please use "git clone" to copy and use the repository☆18Feb 17, 2019Updated 7 years ago
- ☆42Apr 19, 2026Updated 2 weeks ago
- Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long read…☆12Jan 22, 2020Updated 6 years ago
- Identify and annotate TE-mediated insertions in long-read sequence data