nasqar / NASQARLinks
NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization
☆32Updated 5 years ago
Alternatives and similar repositories for NASQAR
Users that are interested in NASQAR are comparing it to the libraries listed below
Sorting:
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Comprehensive Human Expressed SequenceS☆18Updated 2 months ago
- interactive plots for differential expression analysis☆34Updated 3 months ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 6 years ago
- ☆32Updated last year
- Chromatin ACcessibility and Transcriptomics Unifying Software☆17Updated 10 months ago
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆18Updated last year
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Updated 3 years ago
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆18Updated 2 years ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 3 years ago
- Isoform-level functional RNA-Seq analysis 🧬☆25Updated 3 months ago
- Genomic data interpretation and visualization Workshop☆21Updated last month
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆12Updated 2 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆19Updated 3 years ago
- ☆28Updated 2 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 6 months ago
- The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating fro…☆36Updated last year
- 📊 An R package of RNA-seq workflow☆15Updated 3 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- This repository contains the code to run the ASCETS arm-level copy number events caller for targeted sequencing data. ASCETS produces arm…☆16Updated last year
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- ☆17Updated last year
- RNA-seq data comprehensive data analysis toolbox☆19Updated 2 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- methylR: a single shiny solution from sequencer data to pathway analysis☆12Updated 10 months ago
- mitochondrial variant analysis tools☆15Updated 4 years ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆14Updated 5 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago