nasqar / NASQARLinks
NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization
☆32Updated 5 years ago
Alternatives and similar repositories for NASQAR
Users that are interested in NASQAR are comparing it to the libraries listed below
Sorting:
- ☆28Updated 2 years ago
- interactive plots for differential expression analysis☆34Updated 4 months ago
- pathway based data integration and visualization☆41Updated 7 months ago
- Comprehensive Human Expressed SequenceS☆18Updated 3 months ago
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆18Updated last month
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- methylR: a single shiny solution from sequencer data to pathway analysis☆12Updated last year
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆14Updated 5 years ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆20Updated 10 months ago
- An integrated analysis toolkit and pipeline for Next-Generation Sequencing (NGS) panel sequencing data☆14Updated 7 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 7 months ago
- ☆32Updated 5 years ago
- Isoform-level functional RNA-Seq analysis 🧬☆34Updated 2 weeks ago
- ☆23Updated last month
- FunctionaL Omics Processing platform☆13Updated last year
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆13Updated 2 years ago
- RNA-seq data comprehensive data analysis toolbox☆19Updated 3 years ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆17Updated last year
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 3 years ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 3 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Sigflow: Streamline Analysis Workflows for Mutational Signatures, https://github.com/ShixiangWang/sigflow/pkgs/container/sigflow☆29Updated last year
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- A webtool for the clinical interpretation of CNVs in rare disease patients☆12Updated 3 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- A command line tool to compute mapping statistics from a BAM file☆25Updated 3 years ago
- The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating fro…☆36Updated last year
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago
- ☆23Updated 4 years ago