mgijax / mgvLinks
Multiple Genome Viewer
☆12Updated last month
Alternatives and similar repositories for mgv
Users that are interested in mgv are comparing it to the libraries listed below
Sorting:
- Rapid and accurate ancestry inference using SNVs.☆26Updated 2 months ago
- Multiple sequence alignment browser☆11Updated 2 years ago
- The repository keeps the files for an IPython notebook on about how to make a simple genome assembler using python☆30Updated 7 years ago
- Catalogue of pairwise alignment algorithms and benchmarks☆24Updated last year
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆25Updated 2 years ago
- LAVA: Lightweight Assignment of Variant Alleles☆17Updated 7 years ago
- A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments. (Currently unmaintained)☆10Updated last year
- pathoscore evaluates variant pathogenicity tools and scores.☆22Updated 3 years ago
- structure detection program☆17Updated 11 months ago
- interactive Multi Objective K-mer Analysis☆23Updated 2 years ago
- ClaMSA (Classify Multiple Sequence Alignments).☆13Updated 11 months ago
- Build an index for your BAM Index (BAI)☆17Updated 10 years ago
- ☆18Updated 5 years ago
- GBWT-based handle graph☆31Updated last week
- A JBrowse plugin to view multiple alignment format (MAF) files☆27Updated 2 years ago
- Dynamic programming for aa-to-nt alignment with affine gap, splicing and frameshift☆19Updated last year
- BED QC tool (in the making)☆16Updated 3 years ago
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆25Updated 2 weeks ago
- Ultra rapid nanopore whole genome sequencing pipeline, published in https://www.nature.com/articles/s41587-022-01221-5☆19Updated last year
- NGS duplicate marking☆19Updated 4 years ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆17Updated 5 years ago
- ☆15Updated 6 years ago
- ☆13Updated 3 years ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 6 years ago
- Linear-time, low-memory construction of variation graphs☆20Updated 5 years ago
- A lightweight, alignment-free utility for detecting repeat-containing reads in short-read WGS, WES and RNA-seq data.☆18Updated this week
- MEME motif-based sequence analysis tools (http://meme-suite.org), with FreeBSD tweaks☆12Updated 8 years ago
- ☆15Updated 4 years ago
- 🍶 Genome assembly with short sequence reads☆26Updated last year
- ☆13Updated 2 years ago