Simple convertor from bam to FASTQ
☆27Jun 30, 2015Updated 11 years ago
Alternatives and similar repositories for bam2fastq
Users that are interested in bam2fastq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scaffolding of genomic assemblies with RNA seq data☆15Oct 8, 2015Updated 10 years ago
- Scaffolding with RNA-seq read alignment☆21Jul 10, 2018Updated 8 years ago
- Ergatis is a web-based utility that is used to create, run, and monitor reusable computational analysis pipelines.☆16Jan 4, 2023Updated 3 years ago
- Contig Ploidy and Allele Dosage Estimation☆11Oct 30, 2015Updated 10 years ago
- Easily run WDL workflows on GCP☆14Sep 28, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Horizontal Gene Transfer Detection by Mapping Sequencing Reads☆21Aug 31, 2017Updated 8 years ago
- rapid serotyping of Vibrio parahaemolyticus from whole genome sequencing data using serogroup-specific genes☆10Sep 2, 2021Updated 4 years ago
- Naive PCA for genotype data☆10Jul 27, 2016Updated 9 years ago
- de novo targeted gene assembly☆22Apr 16, 2021Updated 5 years ago
- Add multiple thread function for genome comparison☆17Sep 29, 2021Updated 4 years ago
- UniqTag: Content-derived unique and stable identifiers for gene annotation☆10May 4, 2015Updated 11 years ago
- Reduction of Althaps and Duplicate Contigs for Improved Downstream Analysis☆21Jun 28, 2026Updated 3 weeks ago
- ☆36Aug 18, 2024Updated last year
- A listing of the commands, protocols and other notes that I take on a daily basis☆11Oct 25, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- TULIP - The Uncorrected Long read Itegration Pipeline☆27Jan 15, 2018Updated 8 years ago
- Convert Tandem Repeat Finder dat file output into gff3 format☆32Nov 9, 2025Updated 8 months ago
- Computes FRC from SAM/BAM file and not from afg files☆17Oct 5, 2018Updated 7 years ago
- (a) (p)erfect (c)ircle? ... tests DNA sequences for overlapping ends, then trims and rejoins, and aligns reads to test the join☆11Apr 29, 2021Updated 5 years ago
- Archived version 1.0.2☆16Nov 25, 2019Updated 6 years ago
- An example of a data analysis pipeline using Make☆17Jul 26, 2016Updated 9 years ago
- Little sequence file utilities meant to work within Unix pipelines☆37Jan 20, 2015Updated 11 years ago
- chloroplast genome assembly using long reads data☆17Jul 8, 2025Updated last year
- recompute GFA link overlaps☆26Sep 14, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Presentation and exercises for the Software Sustainability Institute Research Data Visualisation Workshop (RDVW)☆15Apr 10, 2018Updated 8 years ago
- BESST - scaffolder for genomic assemblies☆58Jul 6, 2023Updated 3 years ago
- Demonstrating the PRoot program☆11Jul 29, 2016Updated 9 years ago
- Identifying large scale inversions between two genomes by mapping genome 1's unique kmers onto genome 2.☆10Jun 6, 2025Updated last year
- A fuzzy Bruijn graph approach to long noisy reads assembly☆39Mar 15, 2017Updated 9 years ago
- Alignment-based Scrubbing pipeline☆21Mar 14, 2024Updated 2 years ago
- Forensic pedigree analysis and relatedness inference. Part of the pedsuite ecosystem for pedigree analysis in R.☆12Jun 28, 2026Updated 3 weeks ago
- k-mer based assembly evaluation☆351Jul 6, 2026Updated 2 weeks ago
- Parallel/Homoplasic SNP Finder☆20May 3, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Iterative error correction of long reads☆13Dec 9, 2022Updated 3 years ago
- in silico plasmid extraction☆13Sep 18, 2017Updated 8 years ago
- R functions underlying OmicsNet☆20Updated this week
- Formats Roary output for viewing in FriPan☆11May 23, 2018Updated 8 years ago
- A box of genomics tools☆22Jun 10, 2026Updated last month
- Posterior summarisation in Bayesian phylogenetics☆74Sep 27, 2025Updated 9 months ago
- Long read to reference genome mapping tool☆13Mar 14, 2024Updated 2 years ago