jts / bam2fastq
Simple convertor from bam to FASTQ
☆25Updated 9 years ago
Alternatives and similar repositories for bam2fastq:
Users that are interested in bam2fastq are comparing it to the libraries listed below
- ☆27Updated last month
- Exact Tandem Repeat Finder (not a TRF replacement)☆48Updated 5 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- A tutorial on structural variant calling for short read sequencing data☆32Updated 5 months ago
- Population-wide Deletion Calling☆35Updated 6 months ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆51Updated 5 years ago
- Structural variant (SV) analysis tools☆36Updated 9 months ago
- ☆24Updated last month
- perSVade: personalized Structural Variation detection☆38Updated last month
- Structural variant merging tool☆49Updated 7 months ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆64Updated this week
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Structural variant caller☆54Updated 3 years ago
- Evaluate variant calls and its combination with k-mer multiplicity☆66Updated 2 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆37Updated 2 years ago
- Generate unique KMERs for every contig in a FASTA file☆47Updated 2 years ago
- WDL workflows for variant calling and assembly using ONT☆33Updated last week
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 6 years ago
- A set of workflows written in Nextflow for Genome Annotation.☆45Updated 9 months ago
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated 3 months ago
- Transposable element polymorphism identification☆33Updated 4 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 4 years ago
- ☆29Updated 7 months ago
- Adapters for trimming☆30Updated 6 years ago
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆22Updated 2 years ago
- Error correction of ONT transcript reads☆58Updated last year
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆34Updated 4 years ago
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆30Updated 4 years ago
- An easy way to run BioNano genomic analysis☆27Updated 3 years ago