Validate and edit small eukaryotic genome assemblies
☆32Apr 28, 2023Updated 3 years ago
Alternatives and similar repositories for tapestry
Users that are interested in tapestry are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Assembler for raw de novo genome assembly of long uncorrected reads.☆35Dec 11, 2019Updated 6 years ago
- Hybrid Error Correction of Long Reads using Iterative Learning☆10Sep 27, 2018Updated 8 years ago
- ☆35Feb 20, 2020Updated 6 years ago
- H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)☆73Oct 28, 2020Updated 5 years ago
- This repo is deprecated. Please use gfatools instead.☆15Aug 17, 2018Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆80Aug 30, 2016Updated 10 years ago
- A tool for Racon polishing of miniasm assemblies☆84Jul 24, 2026Updated 2 months ago
- Oxford Nanopore HDF/Fast5 to CRAM conversion tool☆22Dec 30, 2019Updated 6 years ago
- Genome assembly soft-masking using Red (REpeat Detector)☆18Dec 7, 2018Updated 7 years ago
- Very very long reads, indeed☆13Apr 30, 2017Updated 9 years ago
- GFA visualizer, GPU-accelerated using Vulkan☆80Aug 2, 2022Updated 4 years ago
- MarginPolish: Graph based assembly polishing☆47Nov 24, 2020Updated 5 years ago
- Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.☆188Jul 30, 2026Updated 2 months ago
- Reference genome quality scores☆20Dec 17, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆29Jul 18, 2026Updated 2 months ago
- Workflows I find helpful for fungal genome annotation☆22Jun 30, 2023Updated 3 years ago
- ☆26Oct 31, 2019Updated 6 years ago
- Simultaneous multi-sample transcript assembler for RNA-seq data☆18Dec 13, 2024Updated last year
- This repository is deprecated, please use the link to the right.☆23Dec 11, 2018Updated 7 years ago
- a toolset for efficient analysis of 10X Genomics linked read data sets, in particular for de novo assembly☆15Nov 27, 2019Updated 6 years ago
- 🌈Scaffold genome sequence assemblies using linked or long read sequencing data☆95Apr 1, 2026Updated 6 months ago
- Ploidy agnostic phasing pipeline and algorithm☆51Jan 3, 2024Updated 2 years ago
- Host depletion optimised for clinical metagenomic sequencing applications☆19Jul 9, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.☆23Dec 6, 2018Updated 7 years ago
- Reduction of Althaps and Duplicate Contigs for Improved Downstream Analysis☆21Oct 2, 2026Updated last week
- This is the official site for JASPER (Jellyfish based Assembly Sequence Polisher for Error Reduction)☆12Jun 27, 2024Updated 2 years ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆54Oct 3, 2026Updated last week
- A plant organellar Graphical Fragment Assembly toolkit☆17Sep 24, 2026Updated 2 weeks ago
- ✏️ Genome assembly polishing & SNV detection☆74Sep 10, 2026Updated 3 weeks ago
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Feb 28, 2017Updated 9 years ago
- A tool for recovering synteny blocks from multiple alignment☆34Oct 18, 2021Updated 4 years ago
- Haplotype-aware genome assembly toolkit☆30Jan 8, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Generate mutated sequence files from a reference genome.☆11Jun 12, 2026Updated 3 months ago
- Pipeline to convert a haploid assembly into diploid☆113Jan 23, 2025Updated last year
- Unzip assembly graphs with Hi-C data and/or long reads.☆29May 7, 2026Updated 5 months ago
- A fast tool for hybrid genome assembly of long and short reads☆78Apr 22, 2020Updated 6 years ago
- Chromosome-level scaffolding using multiple references☆170Sep 8, 2024Updated 2 years ago
- a signal-level demultiplexer for Oxford Nanopore reads☆124Jan 18, 2021Updated 5 years ago
- ☆21Dec 13, 2023Updated 2 years ago