Validate and edit small eukaryotic genome assemblies
☆33Apr 28, 2023Updated 3 years ago
Alternatives and similar repositories for tapestry
Users that are interested in tapestry are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Assembler for raw de novo genome assembly of long uncorrected reads.☆35Dec 11, 2019Updated 6 years ago
- GAPPadder is tool for closing gaps on draft genomes with short sequencing data☆29Jun 1, 2017Updated 9 years ago
- H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)☆74Oct 28, 2020Updated 6 years ago
- ☆35Feb 20, 2020Updated 6 years ago
- Hybrid Error Correction of Long Reads using Iterative Learning☆10Sep 27, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This repo is deprecated. Please use gfatools instead.☆15Aug 17, 2018Updated 8 years ago
- Oxford Nanopore HDF/Fast5 to CRAM conversion tool☆22Dec 30, 2019Updated 6 years ago
- GFA visualizer, GPU-accelerated using Vulkan☆80Aug 2, 2022Updated 4 years ago
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆80Aug 30, 2016Updated 10 years ago
- Prefix-renaming FASTA records really fast.☆18Jun 26, 2024Updated 2 years ago
- A tool for Racon polishing of miniasm assemblies☆84Jul 24, 2026Updated 3 months ago
- Very very long reads, indeed☆13Apr 30, 2017Updated 9 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆47May 27, 2022Updated 4 years ago
- 🌈Scaffold genome sequence assemblies using linked or long read sequencing data☆95Apr 1, 2026Updated 6 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Genome assembly soft-masking using Red (REpeat Detector)☆18Dec 7, 2018Updated 7 years ago
- A tool for recovering synteny blocks from multiple alignment☆34Oct 18, 2021Updated 5 years ago
- Long read to reference genome mapping tool☆13Mar 14, 2024Updated 2 years ago
- Bioinformatics / Explore oligonucleotide composition similarity between assembly contigs or scaffolds to detect contaminant DNA.☆12Feb 27, 2019Updated 7 years ago
- Pipeline to convert a haploid assembly into diploid☆113Jan 23, 2025Updated last year
- This repository is deprecated, please use the link to the right.☆23Dec 11, 2018Updated 7 years ago
- MarginPolish: Graph based assembly polishing☆48Nov 24, 2020Updated 5 years ago
- Unzip assembly graphs with Hi-C data and/or long reads.☆29May 7, 2026Updated 5 months ago
- Reference genome quality scores☆20Dec 17, 2020Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A eukaryotic genome annotation pipeline☆14Oct 20, 2026Updated last week
- ☆16Jan 5, 2018Updated 8 years ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆59Oct 9, 2026Updated 2 weeks ago
- a toolset for efficient analysis of 10X Genomics linked read data sets, in particular for de novo assembly☆15Nov 27, 2019Updated 6 years ago
- Workflows I find helpful for fungal genome annotation☆22Jun 30, 2023Updated 3 years ago
- Chromosome-level scaffolding using multiple references☆170Sep 8, 2024Updated 2 years ago
- ☆26Oct 31, 2019Updated 6 years ago
- Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.☆23Dec 6, 2018Updated 7 years ago
- ☆29Jul 18, 2026Updated 3 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- This is the official site for JASPER (Jellyfish based Assembly Sequence Polisher for Error Reduction)☆12Jun 27, 2024Updated 2 years ago
- ⛓ Correct misassemblies using linked AND long reads☆65Mar 24, 2026Updated 7 months ago
- a Contig Alignment Tool for Pairwise Assembly Comparison☆12Dec 11, 2019Updated 6 years ago
- Simultaneous multi-sample transcript assembler for RNA-seq data☆18Dec 13, 2024Updated last year
- User-friendly tool to quickly go from 16S rRNA sequence data to an OTU matrix☆10Apr 16, 2014Updated 12 years ago
- Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.☆189Jul 30, 2026Updated 2 months ago
- Eukaryotic Genome Annotation Pipeline☆402Updated this week