johnomics / tapestryLinks
Validate and edit small eukaryotic genome assemblies
☆31Updated 2 years ago
Alternatives and similar repositories for tapestry
Users that are interested in tapestry are comparing it to the libraries listed below
Sorting:
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Haplotype-aware genome assembly toolkit☆29Updated 5 years ago
- ☆26Updated 5 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 5 years ago
- 🍊 💫 Trim, circularise and orient long read bacterial genome assemblies☆26Updated 5 years ago
- Find Unique genomic Regions☆30Updated 3 months ago
- Annotated Genome Optimization Using Transcriptome Information☆20Updated 5 years ago
- Mash MinHash search your nucleotide sequences against a NCBI RefSeq genomes database☆42Updated 4 years ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 2 months ago
- ☆42Updated 2 weeks ago
- Read contamination removal☆25Updated last year
- Horizontal Gene Transfer Detection by Mapping Sequencing Reads☆22Updated 7 years ago
- Remove human reads from a sequencing run☆40Updated 9 months ago
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆23Updated 2 years ago
- Assembly based core genome SNP alignments for bacteria☆25Updated 5 years ago
- Output FASTQ summary statistics in JSON format☆30Updated 2 years ago
- ☆17Updated last year
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆32Updated 3 years ago
- Mandrake 🌿/👨🔬🦆 – Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding☆38Updated 4 months ago
- Panache is a web-based interface designed for the visualization of linearized pangenomes. It can be used to show presence/absence informa…☆45Updated 2 years ago
- Scaffolding with assembly likelihood optimization☆22Updated 4 years ago
- Fast and accurate tool for estimating genomic distances between genome-skims☆45Updated last year
- Get microbial sequence data easier and faster☆28Updated 5 years ago
- Automated strain separation of low-complexity metagenomes☆51Updated 3 years ago
- Code to create a PRG from a Multiple Sequence Alignment file☆25Updated 2 weeks ago
- Alignment against all pre-2019 bacteria on laptops within a few hours (former MOF-Search)☆36Updated last year
- reference-based long read assemblies of bacterial genomes☆50Updated 3 years ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆38Updated 4 months ago
- WGS (Wheat) Robust Assembly Pipeline☆22Updated 3 years ago
- ☆26Updated 3 weeks ago