The Dazzler Data Base
☆36Feb 17, 2025Updated last year
Alternatives and similar repositories for DAZZ_DB
Users that are interested in DAZZ_DB are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Find all significant local alignments between reads☆140Jul 3, 2024Updated 2 years ago
- Long read to reference genome mapping tool☆13Mar 14, 2024Updated 2 years ago
- Alignment-based Scrubbing pipeline☆21Mar 14, 2024Updated 2 years ago
- Bax File Decoder and Data Compressor☆33Jan 3, 2024Updated 2 years ago
- d'accord is a non hybrid long read consensus program based on local de Bruijn graph assembly☆19Sep 12, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Scripts to split reference and run mummer in parallel on an SGE cluster☆11Oct 14, 2016Updated 9 years ago
- Fast-SG: An alignment-free algorithm for ultrafast scaffolding graph construction from short or long reads.☆23May 29, 2018Updated 8 years ago
- de novo targeted gene assembly☆22Apr 16, 2021Updated 5 years ago
- source code for HpcGridRunner☆16Aug 2, 2021Updated 4 years ago
- ☆15Mar 7, 2016Updated 10 years ago
- Software accompanying "HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution"☆65Oct 15, 2020Updated 5 years ago
- Scaffolding of genomic assemblies with RNA seq data☆15Oct 8, 2015Updated 10 years ago
- Generate command line parser using getopt_long☆16Dec 11, 2024Updated last year
- Module to determine where repeats are and make soft-masks of said☆10Mar 14, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- The Dagstuhl Format for Assembly☆13Oct 16, 2017Updated 8 years ago
- Demonstrating the PRoot program☆11Jul 29, 2016Updated 10 years ago
- Bayesian Markov Model motif discovery - An expectation maximization algorithm for the de novo discovery of enriched motifs as modelled by…☆20Oct 5, 2017Updated 8 years ago
- Reduction of Althaps and Duplicate Contigs for Improved Downstream Analysis☆21Jun 28, 2026Updated last month
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆38Apr 23, 2025Updated last year
- Reproducible Phylogenomics☆22Jun 28, 2016Updated 10 years ago
- Metagenomic binning suite☆29Sep 30, 2022Updated 3 years ago
- Iterative error correction of long reads☆13Dec 9, 2022Updated 3 years ago
- FALCON: experimental PacBio diploid assembler -- Out-of-date -- Please use a binary release: https://github.com/PacificBiosciences/FALCON…☆205Mar 4, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- BESST - scaffolder for genomic assemblies☆58Jul 6, 2023Updated 3 years ago
- Integrated toolkit for analysis and evaluation of annotated genomes☆25Aug 1, 2025Updated 11 months ago
- Nanopore desc☆18Aug 22, 2016Updated 9 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆64May 18, 2020Updated 6 years ago
- An MPI Toolkit for large-scale genomic analysis☆16Feb 29, 2016Updated 10 years ago
- MOODS: Motif Occurrence Detection Suite☆118May 16, 2023Updated 3 years ago
- ☆15Apr 19, 2018Updated 8 years ago
- Scalable long read self-correction and assembly polishing with multiple sequence alignment☆56Feb 6, 2024Updated 2 years ago
- SVG based genome viewer written in javascript using D3☆33Jul 12, 2015Updated 11 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Python3 module for running MUMmer and reading the output☆33Mar 24, 2025Updated last year
- collection of data structures and algorithms☆19Mar 19, 2019Updated 7 years ago
- de Bruijn graph cOrrectiOn from graph aLignment☆11Jul 20, 2020Updated 6 years ago
- Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets☆214Aug 21, 2024Updated last year
- A single molecule sequence assembler for genomes large and small.☆704Jun 18, 2026Updated last month
- De novo assembly based variant calling pipeline for Illumina short reads☆110Nov 30, 2020Updated 5 years ago
- Code for phasing SVs with SNPs☆54Mar 27, 2020Updated 6 years ago