The Dazzler Data Base
☆36Feb 17, 2025Updated last year
Alternatives and similar repositories for DAZZ_DB
Users that are interested in DAZZ_DB are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Find all significant local alignments between reads☆141Jul 3, 2024Updated 2 years ago
- Long read to reference genome mapping tool☆13Mar 14, 2024Updated 2 years ago
- Alignment-based Scrubbing pipeline☆21Mar 14, 2024Updated 2 years ago
- Bax File Decoder and Data Compressor☆33Jan 3, 2024Updated 2 years ago
- d'accord is a non hybrid long read consensus program based on local de Bruijn graph assembly☆19Sep 12, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Fast-SG: An alignment-free algorithm for ultrafast scaffolding graph construction from short or long reads.☆23May 29, 2018Updated 8 years ago
- Software accompanying "HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution"☆65Oct 15, 2020Updated 6 years ago
- Scripts to split reference and run mummer in parallel on an SGE cluster☆11Oct 14, 2016Updated 10 years ago
- FALCON: experimental PacBio diploid assembler -- Out-of-date -- Please use a binary release: https://github.com/PacificBiosciences/FALCON…☆204Mar 4, 2022Updated 4 years ago
- de novo targeted gene assembly☆22Apr 16, 2021Updated 5 years ago
- ☆15Mar 7, 2016Updated 10 years ago
- Skip-mer tools☆10Sep 4, 2021Updated 5 years ago
- source code for HpcGridRunner☆17Aug 2, 2021Updated 5 years ago
- Streaming algorithm for computing kmer statistics for massive genomics datasets☆54Feb 18, 2020Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Reproducible Phylogenomics☆22Jun 28, 2016Updated 10 years ago
- Metagenomic binning suite☆29Sep 30, 2022Updated 4 years ago
- Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.☆189Jul 30, 2026Updated 3 months ago
- Scaffolding of genomic assemblies with RNA seq data☆15Oct 8, 2015Updated 11 years ago
- The MARVEL assembler☆80Jul 7, 2023Updated 3 years ago
- BESST - scaffolder for genomic assemblies☆58Jul 6, 2023Updated 3 years ago
- Module to determine where repeats are and make soft-masks of said☆10Mar 14, 2024Updated 2 years ago
- UniqTag: Content-derived unique and stable identifiers for gene annotation☆10May 4, 2015Updated 11 years ago
- Making diploid assembly becomes common practice for genomic study☆30Oct 2, 2017Updated 9 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Pipeline for poreathon☆14Dec 17, 2014Updated 11 years ago
- Demonstrating the PRoot program☆11Jul 29, 2016Updated 10 years ago
- The Dagstuhl Format for Assembly☆13Oct 16, 2017Updated 9 years ago
- Bayesian Markov Model motif discovery - An expectation maximization algorithm for the de novo discovery of enriched motifs as modelled by…☆20Oct 5, 2017Updated 9 years ago
- BioSQL web☆14Jun 22, 2009Updated 17 years ago
- tools for error correction and working with long read data☆44Dec 1, 2014Updated 11 years ago
- Error correction for Oxford Nanopore data☆47May 29, 2021Updated 5 years ago
- Generate command line parser using getopt_long☆16Dec 11, 2024Updated last year
- High-performance error correction for Illumina resequencing data☆75May 31, 2016Updated 10 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- 10x Genomics Reads Simulator☆46Aug 10, 2026Updated 2 months ago
- Mummer alignment tool☆579Feb 4, 2025Updated last year
- FastK based version of Merqury☆34Jan 19, 2026Updated 9 months ago
- De novo genome assembler.☆12Jul 30, 2018Updated 8 years ago
- QuickEd is a high-performance exact sequence alignment based on the bound-and-align paradigm.☆31May 5, 2025Updated last year
- FM-index representation of a de Bruijn graph☆27Aug 7, 2017Updated 9 years ago
- A single molecule sequence assembler for genomes large and small.☆707Oct 28, 2026Updated last week