thegenemyers / DAZZ_DBLinks
The Dazzler Data Base
☆36Updated 3 months ago
Alternatives and similar repositories for DAZZ_DB
Users that are interested in DAZZ_DB are comparing it to the libraries listed below
Sorting:
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 7 years ago
- Symmetric DUST for finding low-complexity regions in DNA sequences☆42Updated last year
- Segmental Duplication Assembler (SDA).☆44Updated 2 years ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated 5 months ago
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆22Updated 2 years ago
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- Correct and scaffold assemblies using long reads☆54Updated last year
- deSALT - De Bruijn graph-based Spliced Aligner for Long Transcriptome reads☆44Updated 2 years ago
- Various scripts and recipes for working with nanopore data☆34Updated 9 years ago
- ☆47Updated 4 years ago
- finshingTool☆55Updated 8 years ago
- Making diploid assembly becomes common practice for genomic study☆30Updated 7 years ago
- Scalable long read self-correction and assembly polishing with multiple sequence alignment☆55Updated last year
- Evaluate variant calls and its combination with k-mer multiplicity☆66Updated 2 years ago
- Minor Variant Calling and Phasing Tools☆15Updated 3 years ago
- Fast & accurate alignment of barcoded short-reads☆33Updated last year
- Graph based multi genome aligner☆47Updated 3 years ago
- ☆34Updated 5 years ago
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.☆54Updated 6 months ago
- Alignment-based Scrubbing pipeline☆20Updated last year
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆66Updated 2 years ago
- Custom tools to 'facilitate' BioNano Genomics data analysis☆33Updated 6 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆49Updated 5 years ago
- A toolkit for annotation of transposable element families from unassembled sequence reads☆30Updated 2 years ago
- ☆28Updated last month
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆37Updated 2 years ago
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆74Updated 8 years ago
- TGS scaffolding☆46Updated 3 years ago
- read cloud assembler☆35Updated 6 years ago