Alternatives and similar repositories for RNAseqTool:

Users that are interested in RNAseqTool are comparing it to the libraries listed below

• xryanglab / RiboCode
  release version
  ☆51Updated 2 years ago
• pzweuj / pzweuj.github.io
  Go to
  ☆36Updated this week
• xuzhougeng / org.Osativa.eg.db
  ☆19Updated 5 years ago
• xuzhougeng / R-ChIP-data-analysis
  ☆51Updated 6 years ago
• junjunlab / transPlotR
  An elegant package to visualize gene structures
  ☆73Updated last year
• YuSugihara / MutMap
  MutMap pipeline to identify causative mutations responsible for a phenotype
  ☆52Updated 3 weeks ago
• fudiyi / RNA-seq
  RNA-seq analysis
  ☆30Updated 3 years ago
• benben-miao / TOmicsVis
  Transcriptomics Visualization R package.
  ☆69Updated last year
• scottzijiezhang / m6A-seq_analysis_workflow
  A pipeline to process m6A-seq data and down stream analysis.
  ☆43Updated 4 years ago
• HongboDoll / TomatoSuperPanGenome
  Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…
  ☆50Updated 8 months ago
• junjunlab / GetTransTool
  Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.
  ☆20Updated 2 years ago
• petitmingchang / TO-GCN
  Pipeline of time-ordered gene coexpression network (TO-GCN) construction from three-dimensional (gene expression, condition, and time) da…
  ☆45Updated last year
• iprada / Circle-Map
  A method for circular DNA detection based on probabilistic mapping of ultrashort reads
  ☆61Updated 7 months ago
• BioinfoUNIBA / REDItools2
  ☆54Updated 3 years ago
• compbioNJU / scPlant
  A versatile framework for single-cell transcriptomic data analysis in plants.
  ☆19Updated 11 months ago
• yezhengSTAT / CUTTag_tutorial
  Tutorial Website
  ☆56Updated 4 years ago
• yuanlizhanshi / NGS_Workflow
  Some NGS workflow created by snakemake
  ☆13Updated last month
• guoweilong / cgmaptools
  toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR
  ☆62Updated last year
• ShawnWx2019 / WGCNA-shinyApp
  shiny app for WGCNA...
  ☆28Updated 2 months ago
• OlgaVT / Alternative-Splicing-Tools
  A list of alternative splicing analysis resources
  ☆42Updated 3 months ago
• FelixKrueger / SNPsplit
  Allele-specific alignment sorting
  ☆54Updated 2 years ago
• junjunlab / GetGeneLength
  Extract gene length based on featureCount calculation gene nonredundant exon length method.
  ☆17Updated 3 years ago
• 3UTR / DaPars2
  Dynamics analysis of Alternative PolyAdenylation from RNA-seq
  ☆55Updated last year
• BioSenior / ggVolcano
  The goal of `ggVolcano` is to help users make a beautiful volcano map more easily, including general volcano plot(`ggvolcano`), gradient …
  ☆79Updated last year
• kernco / functional-annotation
  Pipeline for functional annotation of genomes by integrating data from RNA-seq, ChIP-seq, DNase-seq, etc.
  ☆24Updated 2 years ago
• BSSeeker / BSseeker2
  A versatile aligning pipeline for bisulfite sequencing data
  ☆65Updated 6 years ago
• Tong-Chen / Bioinfo_course_python
  ☆30Updated 4 years ago
• tzhu-bio / cisDynet
  An integrated platform for modeling gene-regulatory dynamics and networks
  ☆31Updated 7 months ago
• ENCODE-DCC / hic-pipeline
  HiC uniform processing pipeline
  ☆58Updated last year