Alternatives and similar repositories for RNAseqTool

Users that are interested in RNAseqTool are comparing it to the libraries listed below

• ShujiaHuang / ilus
  A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysi…
  ☆140Updated 6 months ago
• xuzhougeng / org.Osativa.eg.db
  ☆21Updated 6 years ago
• pzweuj / pzweuj.github.io
  Go to
  ☆36Updated this week
• rajewsky-lab / mirdeep2
  Discovering known and novel miRNAs from small RNA sequencing data
  ☆156Updated this week
• xryanglab / RiboCode
  release version
  ☆56Updated 3 years ago
• WGLab / dragonstar2019
  ☆135Updated 6 years ago
• signalbash / how_are_we_stranded_here
  Check strandedness of RNA-Seq fastq files
  ☆128Updated 3 years ago
• petitmingchang / TO-GCN
  Pipeline of time-ordered gene coexpression network (TO-GCN) construction from three-dimensional (gene expression, condition, and time) da…
  ☆52Updated 2 years ago
• xuzhougeng / R-ChIP-data-analysis
  ☆50Updated 7 years ago
• MonashBioinformaticsPlatform / RSeQC
  fork of RSeQC python RNAseq metrics suit of tools
  ☆49Updated 6 years ago
• BioOmics / iSeq
  Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.
  ☆227Updated 3 weeks ago
• ShawnWx2019 / WGCNA-shinyApp
  shiny app for WGCNA...
  ☆32Updated last year
• shenmengyuan / RNA_seq_Biotrainee
  DEG analysis and KEGG/GO enrichment analysis
  ☆69Updated 7 years ago
• Xinglab / rmats2sashimiplot
  ☆155Updated 6 months ago
• YuSugihara / MutMap
  MutMap pipeline to identify causative mutations responsible for a phenotype
  ☆62Updated 10 months ago
• nloyfer / wgbs_tools
  tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies
  ☆175Updated last week
• guoweilong / cgmaptools
  toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR
  ☆67Updated last year
• bli25 / RSEM_tutorial
  A short tutorial on how to use RSEM
  ☆139Updated 5 years ago
• junjunlab / transPlotR
  An elegant package to visualize gene structures
  ☆82Updated 2 years ago
• iprada / Circle-Map
  A method for circular DNA detection based on probabilistic mapping of ultrashort reads
  ☆66Updated last year
• nongxinshengxin / teach-you-to-plot-by-R
  教你用R语言绘制好看的发表级图表
  ☆26Updated 11 months ago
• BSSeeker / BSseeker2
  A versatile aligning pipeline for bisulfite sequencing data
  ☆66Updated 7 years ago
• zhxiaokang / RASflow
  RNA-Seq analysis workflow
  ☆105Updated 4 years ago
• PiaoyangGuohai1 / WES-analysis
  ☆31Updated 2 years ago
• PoisonAlien / trackplot
  Generate IGV style locus tracks from bigWig files in R
  ☆175Updated last year
• iMetaScience / iMetaPlot
  iMeta teaches you to plot
  ☆54Updated 2 years ago
• YongxinLiu / Liu2020ProteinCell
  Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome
  ☆44Updated 5 years ago
• FelixKrueger / SNPsplit
  Allele-specific alignment sorting
  ☆61Updated 2 years ago
• ying-ge / FigureYa
  ☆329Updated last week
• CebolaLab / RNA-seq
  Step-by-step analysis pipeline for RNA-seq data
  ☆158Updated 2 years ago