rbouckaert / starbeast3Links
☆19Updated 3 weeks ago
Alternatives and similar repositories for starbeast3
Users that are interested in starbeast3 are comparing it to the libraries listed below
Sorting:
- A tool to infer species tree and phylogenetic network from multilocus data☆32Updated 5 years ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆34Updated last year
- ☆22Updated 11 years ago
- Phylogenetic penalized likelihood☆49Updated last month
- ☆41Updated last year
- Helper scripts for processing and visualization of phylogenetics datasets☆29Updated last year
- Two-dimensional outlier detection algorithm for pinpointing errors in small species-specific stretches of the multiple sequence alignment…☆14Updated last year
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 5 years ago
- Alignment-Based Sequence extraction☆15Updated 3 years ago
- ☆18Updated 4 years ago
- Code for computing various support scores for internodes☆19Updated 5 years ago
- ☆15Updated last year
- Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction☆11Updated 10 years ago
- Simple scripts for concatenate alignments and rename terminals for phylogenetics☆21Updated 2 years ago
- PhyloBayes: phylogenetic reconstruction using infinite mixtures (CAT and CAT-GTR) -- serial version (for MPI, see pbmpi.git)☆15Updated 3 years ago
- R package for analysis of hybrids and hybrid zones☆21Updated last year
- Calculate Hybrid Index and Heterozygosity from SNP data☆10Updated 3 months ago
- A massively parallel tool for model selection and tree inference on thousands of genes☆50Updated last year
- spruceup☆24Updated 11 months ago
- Quartet Sampling method for phylogenetic branch support evaluation☆18Updated last year
- R package for comparison of synteny conservation at the genome-wide scale.☆14Updated last year
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆60Updated 9 months ago
- Automated de novo assembly of whole chloroplast genomes.☆46Updated 10 months ago
- Bayesian molecular clock dating tutorial with genome-scale datasets☆19Updated 3 years ago
- ☆19Updated 7 years ago
- Detecting natural selection from population-based genetic data☆27Updated 6 years ago
- Genome-wide de novo genotyping with 2bRAD☆23Updated 2 months ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆37Updated last year
- Visualizing gene tree conflict using Phyparts, and ETE3☆14Updated 2 years ago
- FASconCAT-G offers a wide range of possibilities to edit and concatenate multiple nucleotide, amino acid, and structure sequence alignmen…☆34Updated last year