☆22Jun 24, 2026Updated last month
Alternatives and similar repositories for starbeast3
Users that are interested in starbeast3 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- mPTP - a tool for single-locus species delimitation☆30Mar 14, 2026Updated 4 months ago
- ☆15Mar 20, 2023Updated 3 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆33Jul 9, 2026Updated 2 weeks ago
- Bacterial phylogenetics in BEAST 2.☆18Mar 30, 2023Updated 3 years ago
- Tools for F1 hybrid PSMC (hPSMC) divergence time inference from whole genomes☆15May 29, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- an ensemble usage of MAFFT-linsi --add on large datasets☆13May 31, 2024Updated 2 years ago
- ☆48Sep 5, 2023Updated 2 years ago
- Machuruku☆32Jan 20, 2025Updated last year
- PhyloBayes: phylogenetic reconstruction using infinite mixtures (CAT and CAT-GTR) -- serial version (for MPI, see pbmpi.git)☆15Oct 21, 2021Updated 4 years ago
- A tool to root phylogenies☆23Sep 5, 2024Updated last year
- Fast, accurate species tree estimation.☆13Aug 29, 2024Updated last year
- Scripts for file processing and analysis in phylogenetics and phylogeography☆14Jan 6, 2021Updated 5 years ago
- A python tool for rapidly assessing the monophyly of user-defined groups in phylogenetic trees.☆12Apr 25, 2024Updated 2 years ago
- BUSCOMP: BUSCO Compiler and Comparison tool☆22Sep 19, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- R and Python scripts used to simulate gene trees under coalescent model and detect gene flow using triple frequency☆16Dec 15, 2022Updated 3 years ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆31Jul 13, 2026Updated last week
- Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction☆11Sep 29, 2014Updated 11 years ago
- Visualing species tree from ASTRAL with gene tree discordance☆33Jul 3, 2026Updated 3 weeks ago
- ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-orth…☆25Updated this week
- A versatile simulation engine for stochastic population dynamics models.☆23Nov 11, 2022Updated 3 years ago
- Simple scripts for concatenate alignments and rename terminals for phylogenetics☆22Sep 20, 2022Updated 3 years ago
- ☆12Feb 16, 2025Updated last year
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆46Nov 21, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆13Dec 20, 2022Updated 3 years ago
- Phylogenetic penalized likelihood☆58Jun 27, 2025Updated last year
- Workflow to detect and phase hybrids in target capture data☆20Mar 9, 2023Updated 3 years ago
- Bayesian molecular clock dating tutorial with genome-scale datasets☆19Dec 4, 2021Updated 4 years ago
- R package for comparison of synteny conservation at the genome-wide scale.☆16Jun 6, 2024Updated 2 years ago
- python-nexus - Generic nexus (.nex, .trees) reader/writer for python☆11Feb 20, 2025Updated last year
- FASconCAT-G offers a wide range of possibilities to edit and concatenate multiple nucleotide, amino acid, and structure sequence alignmen…☆35Jun 12, 2024Updated 2 years ago
- ☆83May 2, 2026Updated 2 months ago
- MCMC algorithms to identify linguistic contact zones☆15Jul 15, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Oct 30, 2018Updated 7 years ago
- Bayesian species delimitation integrating genes and traits☆12Aug 17, 2021Updated 4 years ago
- Detection of evolutionary shifts in Ornstein-Uhlenbeck models☆19Aug 5, 2022Updated 3 years ago
- Quantifying Introgression via Branch Lengths☆58Sep 30, 2022Updated 3 years ago
- Scripts used in the annotation of B10K genomes☆16Jun 1, 2020Updated 6 years ago
- Tutorials and materials for planning a HybSeq project, processing sequences, and conducting phylogenomic analyses.☆16May 19, 2017Updated 9 years ago
- ☆91Jun 26, 2026Updated last month