☆25Feb 2, 2024Updated 2 years ago
Alternatives and similar repositories for single-cell-vocabulary
Users that are interested in single-cell-vocabulary are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16May 17, 2022Updated 3 years ago
- ☆14Feb 17, 2022Updated 4 years ago
- Python Library for data analysis based on GMQL☆15Dec 1, 2021Updated 4 years ago
- TUI Youtube Player using Elm Architecture and mpv JSON IPC☆18Jun 6, 2023Updated 2 years ago
- Perform differential transcript usage (DTU) analysis of bulk or single-cell RNA-seq data. See documentation at:☆23Mar 30, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Teaching modules for Human Genome Variation Lab.☆21Jun 6, 2025Updated 10 months ago
- An R package for Splice-aware quantification of translation using Ribo-seq data☆19Dec 20, 2023Updated 2 years ago
- DOLPHIN: Advances Single-cell RNA-seq Analysis Beyond Gene-Level by Integrating Exon-Level Quantification and Junction Reads with Deep Ne…☆14Jul 16, 2025Updated 9 months ago
- This package provides a function to reformat lists of genome coverage files, such as bigWig of bam files, into the directory structure of…☆29Apr 29, 2024Updated 2 years ago
- Just the leafviz parts of Leafcutter☆15Apr 2, 2026Updated 3 weeks ago
- Splicing-aware time-course network enricher - exploratory analysis for transcriptomics and/or proteomics time series data☆12Dec 11, 2025Updated 4 months ago
- Structural variant VCF annotation, duplicate removal and comparison☆37Oct 14, 2025Updated 6 months ago
- Genome assembly soft-masking using Red (REpeat Detector)☆18Dec 7, 2018Updated 7 years ago
- Command line tools for IntSpan related bioinformatics operations☆12Apr 9, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Expedition suite for computing, visualizing, and analyzing single-cell alternative splicing data☆11Jun 29, 2017Updated 8 years ago
- Introduction to Git and Github using RStudio and R☆13Feb 3, 2025Updated last year
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆27Mar 3, 2026Updated last month
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆14Oct 7, 2024Updated last year
- Nextflow pipeline to re-process all public single-cell RNA-seq data☆33Jul 9, 2025Updated 9 months ago
- Tools for detecting alternative splicing events and genotype in single-cell gene expression data.☆15Jan 16, 2024Updated 2 years ago
- All design files and scripts necessary for the construction and use of the optoPlate-96☆11Apr 28, 2022Updated 4 years ago
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆15Apr 14, 2025Updated last year
- Genomic Visualization Catalog☆13Oct 6, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Utility functions to extend and optimize GenomicRanges functionality.☆10Mar 6, 2025Updated last year
- This is a repository for development of the SARS-CoV-2 Bioinformatics for Beginners Course☆11Jul 5, 2024Updated last year
- ☆10May 31, 2022Updated 3 years ago
- Sorted grep.☆13Mar 26, 2015Updated 11 years ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Mar 4, 2024Updated 2 years ago
- Computer-Aided Process Planner (CAPP) for Synthetic Biology Research☆11Jun 1, 2021Updated 4 years ago
- Workflow for Nanopore Sequencing of 10x single cell libraries☆19Mar 20, 2025Updated last year
- A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.☆17Apr 20, 2026Updated last week
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆27Oct 14, 2025Updated 6 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Analysis of single-cell ChIP-seq datasets : From count matrices to differential analysis☆21Jun 2, 2020Updated 5 years ago
- List of conferences with talk videos posted online☆12Sep 23, 2023Updated 2 years ago
- ☆14May 7, 2019Updated 6 years ago
- ☆14Mar 23, 2026Updated last month
- An efficient CLI to extract sequences from the SRA☆122Mar 4, 2026Updated last month
- Single cell Nanopore sequencing data for Genotype and Phenotype☆58May 15, 2025Updated 11 months ago
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆19Sep 29, 2025Updated 7 months ago