☆25Feb 2, 2024Updated 2 years ago
Alternatives and similar repositories for single-cell-vocabulary
Users that are interested in single-cell-vocabulary are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16May 17, 2022Updated 4 years ago
- ☆14Feb 17, 2022Updated 4 years ago
- Python Library for data analysis based on GMQL☆15Dec 1, 2021Updated 4 years ago
- Perform differential transcript usage (DTU) analysis of bulk or single-cell RNA-seq data. See documentation at:☆23Mar 30, 2024Updated 2 years ago
- TUI Youtube Player using Elm Architecture and mpv JSON IPC☆18Jun 6, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Teaching modules for Human Genome Variation Lab.☆22Jun 6, 2025Updated last year
- An R package for Splice-aware quantification of translation using Ribo-seq data☆21Dec 20, 2023Updated 2 years ago
- DOLPHIN: Advances Single-cell RNA-seq Analysis Beyond Gene-Level by Integrating Exon-Level Quantification and Junction Reads with Deep Ne…☆14Jul 16, 2025Updated last year
- This package provides a function to reformat lists of genome coverage files, such as bigWig of bam files, into the directory structure of…☆29Apr 29, 2024Updated 2 years ago
- Splicing-aware time-course network enricher - exploratory analysis for transcriptomics and/or proteomics time series data☆11Dec 11, 2025Updated 8 months ago
- Command line tools for IntSpan related bioinformatics operations☆12Apr 9, 2025Updated last year
- Genome assembly soft-masking using Red (REpeat Detector)☆18Dec 7, 2018Updated 7 years ago
- Introduction to Git and Github using RStudio and R☆13Feb 3, 2025Updated last year
- Expedition suite for computing, visualizing, and analyzing single-cell alternative splicing data☆11Jun 29, 2017Updated 9 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆27Mar 3, 2026Updated 5 months ago
- A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.☆18Aug 3, 2026Updated last week
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆14May 13, 2026Updated 2 months ago
- Tools for detecting alternative splicing events and genotype in single-cell gene expression data.☆15Jan 16, 2024Updated 2 years ago
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆17Apr 14, 2025Updated last year
- The Isoforms from Single-Cell; Long-read Expression Suite☆40Jan 14, 2025Updated last year
- Code used to analyse and plot metadata of metagenomic binning tools☆14Aug 22, 2024Updated last year
- ☆10May 31, 2022Updated 4 years ago
- Genomic Visualization Catalog☆13Oct 6, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- All design files and scripts necessary for the construction and use of the optoPlate-96☆11Apr 28, 2022Updated 4 years ago
- A brief introduction to agentic coding principles and practice☆48Jul 22, 2026Updated 2 weeks ago
- Sorted grep.☆13Mar 26, 2015Updated 11 years ago
- Design, fabrication, and assembly files for CMOS imaging sensor PCB☆15Mar 16, 2017Updated 9 years ago
- The Permutation Test - A Visual Explanation of Statistical Testing☆18Jul 13, 2024Updated 2 years ago
- Structural variant VCF annotation, duplicate removal and comparison☆38Oct 14, 2025Updated 9 months ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Mar 4, 2024Updated 2 years ago
- Workflow for Nanopore Sequencing of 10x single cell libraries☆19Mar 20, 2025Updated last year
- Utility functions to extend and optimize GenomicRanges functionality.☆10Jul 9, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Computer-Aided Process Planner (CAPP) for Synthetic Biology Research☆11Jun 1, 2021Updated 5 years ago
- Analysis of single-cell ChIP-seq datasets : From count matrices to differential analysis☆21Jun 2, 2020Updated 6 years ago
- Single cell Nanopore sequencing data for Genotype and Phenotype☆61May 15, 2025Updated last year
- List of conferences with talk videos posted online☆12Sep 23, 2023Updated 2 years ago
- A count based method for detecting doublets from single nucleus ATAC-seq (snATAC-seq) data.☆34Jan 3, 2023Updated 3 years ago
- An efficient CLI to extract sequences from the SRA☆124Jun 12, 2026Updated last month
- ☆15Jul 1, 2026Updated last month