This package provides a function to reformat lists of genome coverage files, such as bigWig of bam files, into the directory structure of a UCSC Track Hub ready to be visualized in the genome browser. For details about it's use, please have a look at the vignette of the package.
☆28Apr 29, 2024Updated last year
Alternatives and similar repositories for easyTrackHubs
Users that are interested in easyTrackHubs are comparing it to the libraries listed below
Sorting:
- A library and tool for accessing remote BLOW5 files.☆24Feb 5, 2026Updated 3 weeks ago
- ☆13Nov 15, 2017Updated 8 years ago
- Various multi-trait association tests in R☆11Oct 30, 2018Updated 7 years ago
- Genomic Visualization Catalog☆13Oct 6, 2022Updated 3 years ago
- ☆25Feb 2, 2024Updated 2 years ago
- Web-Application for the cross-visualization of HiC and ChIP-seq data.☆18Feb 17, 2026Updated last week
- A segmentation approach to analyze DNA methylation patterns and identify differentially methylation regions from whole-genome datasets☆19Feb 16, 2026Updated 2 weeks ago
- ☆18Apr 20, 2025Updated 10 months ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 3 years ago
- An R package to process and analyze transcriptomic data☆19Jun 18, 2025Updated 8 months ago
- structure detection program☆18Nov 20, 2024Updated last year
- R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases☆23Jan 30, 2026Updated last month
- 🐶 hlabud: HLA genotype analysis in R☆17Apr 11, 2025Updated 10 months ago
- ☆19Aug 8, 2023Updated 2 years ago
- Kmer based genotyper for short reads.☆23Oct 19, 2021Updated 4 years ago
- Tools to gather evidence for structural variation via breakpoint detection.☆20Feb 21, 2026Updated last week
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆53Mar 6, 2025Updated 11 months ago
- Methylmap is a tool for visualization of modified nucleotide frequencies for large cohort sizes.☆21Jan 23, 2026Updated last month
- commandline manipulation of genomic variants and NGS reads☆19Sep 6, 2024Updated last year
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆21Dec 14, 2021Updated 4 years ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Sep 5, 2024Updated last year
- gt in officeverse☆30Sep 26, 2024Updated last year
- Variant Call Format (VCF) parser☆26Jan 21, 2026Updated last month
- Visualization tool for (meta)genome assembly graphs☆25Updated this week
- AirLift is a tool that updates mapped reads from one reference genome to another. Unlike existing tools, It accounts for regions not shar…☆28May 23, 2024Updated last year
- Integrated workflow for SV calling from single-cell Strand-seq data☆26Feb 18, 2026Updated last week
- ☆344Apr 16, 2025Updated 10 months ago
- Generate IGV style locus tracks from bigWig files in R☆183Oct 28, 2024Updated last year
- Pipeline to analyse ChIP-Rx data, i.e ChIP-Seq with reference exogenous genome spike-in normalization☆15Sep 18, 2025Updated 5 months ago
- ☆14Feb 18, 2026Updated last week
- A novel management, annotation, and machine learning framework for analyzing cancer mutations☆31Jul 4, 2024Updated last year
- Viola is a flexible and powerful python package designed specifically for analysis of genomic structural variant (SV) signatures.☆27Jul 26, 2024Updated last year
- Bam Read Index - Extract alignments from a bam file by readname☆28Apr 22, 2024Updated last year
- Package to wrangle and visualize genomic data in R☆26Feb 10, 2026Updated 2 weeks ago
- ☆34Nov 14, 2025Updated 3 months ago
- visualize CNV data from targeted capture based sequencing data☆34May 10, 2021Updated 4 years ago
- Visualize and annotate genomic coverage with ggplot2☆271Jan 24, 2025Updated last year
- A better, faster way to count guides in CRISPR screens.☆34Apr 11, 2025Updated 10 months ago
- Structural variant VCF annotation, duplicate removal and comparison☆36Oct 14, 2025Updated 4 months ago