BiocPy / rds2pyLinks
Read RDS files, in Python
☆25Updated this week
Alternatives and similar repositories for rds2py
Users that are interested in rds2py are comparing it to the libraries listed below
Sorting:
- Template for building a bioconductor workshop package using github actions☆21Updated 6 months ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆10Updated last year
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆21Updated 4 months ago
- Converts 'MultiQC' Reports into Tidy Data Frames☆19Updated last year
- This is the ensembldb development repository.☆36Updated 4 months ago
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆27Updated last month
- integrative pathway analysis with modern PCA methodology and gene selection☆11Updated 2 years ago
- A GenePattern module for running the ssGSEA method☆14Updated 10 months ago
- Interactive benchmarking of ranking and assignment methods☆16Updated last month
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆31Updated last month
- R interface to 'Gos'☆39Updated 2 years ago
- A Grammar of Data Manipulation for Omics Data☆21Updated 5 years ago
- Reproducible GSEA Benchmarking☆13Updated 2 months ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated 2 months ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- tools in python and R for analyzing biological count data, especially from single cell RNAseq☆22Updated last year
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆22Updated 2 months ago
- Workshop materials for cBioPortal Webinar 5: API & R Client☆19Updated 5 years ago
- The blog of tidyomics☆14Updated 6 months ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆27Updated 3 months ago
- Seamlessly integrate R packages into Python.☆21Updated 2 years ago
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆14Updated 9 months ago
- Take command of your set enrichment analyses.☆22Updated this week
- Clone of the Bioconductor repository for the basilisk package.☆29Updated 2 months ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- zero-inflated negative binomial gene expression in R☆20Updated 7 years ago
- Semantic Similarity in Bio-Ontologies☆18Updated 4 months ago
- Assessing the increase in power from increasing read depth in a given RNA-Seq study☆13Updated 6 years ago
- Gene network analysis☆19Updated 3 years ago
- Create QC and summary reports for Alevin output☆31Updated last month