intermine / InterMineR
R package for InterMine
☆18Updated 3 years ago
Alternatives and similar repositories for InterMineR:
Users that are interested in InterMineR are comparing it to the libraries listed below
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆28Updated last month
- JAMM Peak Finder for Sequencing Datasets☆29Updated 5 years ago
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- R interface to genome annotation files and the UCSC genome browser☆32Updated 3 weeks ago
- Template for building a bioconductor workshop package using github actions☆20Updated 9 months ago
- The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.☆34Updated 6 months ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 3 years ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Updated 5 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 8 months ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆18Updated 5 years ago
- Introduction to the Bioconductor project☆18Updated this week
- Seamless Integration of BLAST Sequence Searches in R☆31Updated last year
- Tools for visualizing genomics data☆67Updated 3 years ago
- ☆28Updated 9 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Clone of the Bioconductor repository for the basilisk package.☆27Updated this week
- uORF-Tools are a workflow and a collection of tools for the analysis of 'Upstream Open Reading Frames' (short uORFs)☆13Updated 5 years ago
- R package for genomic feature analysis and visualization☆76Updated this week
- ☆19Updated 2 years ago
- Package to calculate functional similarity between genes https://biocor.llrs.dev☆14Updated 3 months ago
- The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generat…☆28Updated 7 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- ☆35Updated 4 years ago
- Sample Level Analysis of Pathway Alteration Enrichments☆9Updated 6 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 6 months ago
- Differential expression and allelic analysis, nonparametric statistics☆28Updated 3 months ago
- Response to blog post about Salmon☆37Updated 7 years ago
- Transcript quantification import with automatic metadata detection☆68Updated 2 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 5 years ago
- Representation and manipulation of genomic intervals☆45Updated this week