Accio / KEGGgraphLinks
The KEGGgraph package to parse KEGG pathways in R into graph objects
☆14Updated 5 months ago
Alternatives and similar repositories for KEGGgraph
Users that are interested in KEGGgraph are comparing it to the libraries listed below
Sorting:
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆22Updated 3 months ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆10Updated 5 months ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆20Updated 5 months ago
- Machine learning use cases for teaching☆13Updated 8 years ago
- Template for building a bioconductor workshop package using github actions☆21Updated 3 months ago
- 🐶 hlabud: HLA genotype analysis in R☆17Updated 5 months ago
- R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)☆24Updated 4 months ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆18Updated last week
- This is the ensembldb development repository.☆35Updated last month
- GEO RNA-seq Experiments Processing Pipeline☆21Updated 5 years ago
- The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.☆35Updated last year
- Explore the cancer relevance of your gene list☆52Updated 2 weeks ago
- Gene-level general linear mixed model☆23Updated last week
- ☆28Updated 2 years ago
- Single Cell multimodal data scripts for downloading datasets☆17Updated 3 months ago
- Accessing AlphaMissense Data Resources in R☆10Updated 2 months ago
- an R package for deep mining gene co-expression networks in multi-trait expression data☆21Updated last month
- TFregulomeR reveals transcription factors’ context-specific features and functions☆16Updated 3 years ago
- An R package to plot interactive three-way differential expression analysis☆38Updated 2 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆13Updated 2 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Gene network analysis☆19Updated 2 years ago
- Interactive benchmarking of ranking and assignment methods☆14Updated 2 months ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Toolbox package for organizing and working with TCGA data☆28Updated 2 months ago
- Network Visualization using both GUI and Programming☆29Updated 4 months ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- ☆31Updated last year