The KEGGgraph package to parse KEGG pathways in R into graph objects
☆17Apr 14, 2025Updated last year
Alternatives and similar repositories for KEGGgraph
Users that are interested in KEGGgraph are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Kyoto Encylopedia of Genes and Genomes (KEGG) NetworkX Topological parser automates downloading, parsing, and converting from a KEGG Mark…☆12May 8, 2024Updated 2 years ago
- Client-side REST access to KEGG☆15Jul 22, 2026Updated last month
- ☆11Dec 28, 2019Updated 6 years ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆10May 14, 2026Updated 3 months ago
- Code and analysis for the 1000 tools paper☆11Nov 12, 2021Updated 4 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- the Metagenomic test for Presence Or Absence of Pathways☆13Mar 4, 2019Updated 7 years ago
- AnADAMA2 is the next generation of AnADAMA (Another Automated Data Analysis Management Application). AnADAMA is a tool to capture your wo…☆12Mar 25, 2026Updated 5 months ago
- ☆17Nov 23, 2021Updated 4 years ago
- Tutorial for the analysis of scRNA-seq data in R☆18Aug 28, 2018Updated 8 years ago
- pathway based data integration and visualization☆51Mar 28, 2025Updated last year
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Mar 7, 2020Updated 6 years ago
- ☆15May 7, 2019Updated 7 years ago
- Seamlessly integrate R packages into Python.☆21Apr 12, 2023Updated 3 years ago
- 🔍 Enable AI assistants to search and access bioRxiv papers through a simple MCP interface.☆25Mar 18, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- HyPhy tutorials☆11Apr 9, 2018Updated 8 years ago
- This is the repository for SeCNV, a single cell copy number profiling tool.☆12Dec 12, 2024Updated last year
- A visualization tool for Systems-Level Interactive Data Exploration☆12Jan 12, 2022Updated 4 years ago
- ☆20Jul 12, 2023Updated 3 years ago
- MineYourSymbiont : Targetted genome assembly for metagenomics pipeline.☆10Mar 3, 2023Updated 3 years ago
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆33Aug 22, 2024Updated 2 years ago
- Error & warning handling for R inspired by go☆22Jan 28, 2024Updated 2 years ago
- numerical derivative lib☆13Mar 18, 2014Updated 12 years ago
- Killifish genomics scripts☆12Feb 19, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.☆12Mar 3, 2017Updated 9 years ago
- Command line client and Python libraries for CosmosID API☆13Oct 28, 2025Updated 10 months ago
- Manipulate KEGG networks as NetworkX objects in in Python☆10Jan 21, 2022Updated 4 years ago
- ☆12Feb 26, 2019Updated 7 years ago
- use paired-end transcriptome reads to scaffold genomes☆12May 30, 2019Updated 7 years ago
- ☆16Aug 24, 2026Updated last week
- Reproducible GSEA Benchmarking☆14May 14, 2026Updated 3 months ago
- a simple R data package for curated cancer pathway-specific gene lists☆13Mar 31, 2020Updated 6 years ago
- Simple scVI implementation☆13Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 6 years ago
- ACTIONet single-cell analysis framework☆47Updated this week
- Wrapper for the genoPlotR R package. This wrapper makes phylogeny, genbank files and blast comparisons that is needed for the genoPLotR p…☆14Oct 5, 2021Updated 4 years ago
- Map genetic variants and protein positions to protein interfaces in 3D☆13Sep 22, 2023Updated 2 years ago
- Exploring Isoform-specific interactions☆13Jul 23, 2026Updated last month
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆20Jan 24, 2024Updated 2 years ago
- Implementation of Stochastic Depth Networks in Keras☆13Sep 10, 2016Updated 9 years ago