Accio / KEGGgraphLinks
The KEGGgraph package to parse KEGG pathways in R into graph objects
☆14Updated 7 months ago
Alternatives and similar repositories for KEGGgraph
Users that are interested in KEGGgraph are comparing it to the libraries listed below
Sorting:
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Gene-level general linear mixed model☆23Updated last month
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆20Updated 2 weeks ago
- This is the ensembldb development repository.☆35Updated 3 months ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆10Updated 2 weeks ago
- Explore the cancer relevance of your gene list☆52Updated 2 months ago
- 🐶 hlabud: HLA genotype analysis in R☆17Updated 7 months ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆22Updated 3 weeks ago
- Machine learning use cases for teaching☆13Updated 8 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last month
- GEO RNA-seq Experiments Processing Pipeline☆21Updated 6 years ago
- ☆28Updated 2 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆13Updated 2 years ago
- The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.☆35Updated last year
- Differential analysis of multi-omics data based on the Tweedie distribution☆28Updated last year
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- Interactive benchmarking of ranking and assignment methods☆16Updated 3 weeks ago
- interactive plots for differential expression analysis☆34Updated 5 months ago
- ☆29Updated last year
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆18Updated last month
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆10Updated last year
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆25Updated this week
- Client for the Bioconductor AnnotationHub web resource☆19Updated 2 weeks ago
- ☆31Updated last year
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆31Updated 6 months ago
- TFregulomeR reveals transcription factors’ context-specific features and functions☆15Updated 3 years ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 4 years ago
- Statistical power studies for multi-omics experiments.☆32Updated 10 months ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Molecular Signatures Database (MSigDB) in a data frame☆16Updated 6 years ago