Dot: An interactive dot plot viewer for comparative genomics
☆38Jun 22, 2026Updated 2 months ago
Alternatives and similar repositories for dot
Users that are interested in dot are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Nov 15, 2017Updated 8 years ago
- Simple tools for working with Hi-C data☆20Dec 19, 2018Updated 7 years ago
- Creates an N-chart for comparing assembly lengths, including script for counting assembly lengths from a fasta file☆13Feb 2, 2017Updated 9 years ago
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Feb 28, 2017Updated 9 years ago
- Nucmer from Mummer3 followed by ggplot for nicer and more customisable genome alignment plots.☆12Feb 25, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆15Aug 6, 2018Updated 8 years ago
- comparative genome dot plot viewer☆10May 19, 2019Updated 7 years ago
- A tool for recovering synteny blocks from multiple alignment☆34Oct 18, 2021Updated 4 years ago
- Guided synteny alignment between duplicated genomes (within specified quota constraint)☆60Sep 5, 2017Updated 9 years ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆87May 25, 2021Updated 5 years ago
- ☆17Sep 7, 2026Updated 2 weeks ago
- A tool for discovering transposable elements and describing patterns of genome evolution☆32Apr 23, 2023Updated 3 years ago
- Scripts to split reference and run mummer in parallel on an SGE cluster☆11Oct 14, 2016Updated 9 years ago
- A comparative genome scaffolding tool☆16Oct 6, 2018Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- assembly evaluation tool☆35May 11, 2022Updated 4 years ago
- GFF toolkit☆17May 23, 2026Updated 3 months ago
- WGS (Wheat) Robust Assembly Pipeline☆22Sep 4, 2021Updated 5 years ago
- Repository of common bioinformatics scripts☆39Sep 21, 2021Updated 4 years ago
- Yet another Hi-C scaffolding tool☆23Oct 23, 2024Updated last year
- ☆18Jun 30, 2023Updated 3 years ago
- Add multiple thread function for genome comparison☆17Sep 29, 2021Updated 4 years ago
- Modular Multi-scale Integrated Genome Graph Browser☆100Jul 23, 2026Updated last month
- ☆78Jun 12, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- BlasterJS - an open source JS library to display Blast results