roryk / tiny-test-data
Super small biological datasets for unit testing
☆60Updated 5 years ago
Alternatives and similar repositories for tiny-test-data
Users that are interested in tiny-test-data are comparing it to the libraries listed below
Sorting:
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆140Updated last month
- Reference genome resource manager☆76Updated last year
- Maximum likelihood demultiplexing☆47Updated 3 months ago
- A read extraction and realignment tool for next generation sequencing data☆100Updated 2 years ago
- ☆82Updated 3 years ago
- Analysis pipelines from Oxford Nanopore Technologies' Research Division☆50Updated 4 years ago
- BigWig and BAM utilities☆96Updated last year
- don't get DUP'ed or DEL'ed by your putative SVs.☆105Updated 4 years ago
- Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines☆41Updated this week
- Scallop is a reference-based transcriptome assembler for RNA-seq☆90Updated 4 years ago
- The Zavolab Automated RNA-seq Pipeline☆35Updated last week
- A collection of modules and sub-workflows for Nextflow☆26Updated last week
- Filtering and profiling of next-generational sequencing data using region-specific rules☆77Updated last year
- Params validation plugin for Nextflow pipelines☆48Updated 9 months ago
- Software for predicting library complexity and genome coverage in high-throughput sequencing.☆82Updated 6 months ago
- Exon-exon splice junctions across SRA☆40Updated 3 years ago
- Read visualizer for structural variants☆83Updated 6 years ago
- An awk-like VCF parser☆56Updated last year
- Galaxy RNA workbench☆40Updated 4 years ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆51Updated 5 years ago
- FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine☆31Updated last month
- create a gemini-compatible database from a VCF☆56Updated 4 years ago
- Bioinformatics workflows developed for and used on the St. Jude Cloud project.☆36Updated this week
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- Building SuperTranscripts: A linear representation of transcriptome data☆67Updated 4 years ago
- Method for detecting STR expansions from short-read sequencing data☆62Updated 3 years ago
- ☆120Updated 6 months ago
- Mutation Identification Pipeline. Read the latest documentation:☆44Updated last year
- Merging paired-end reads and removing adapters☆30Updated 5 years ago
- Web application to collect and visualise data across multiple MultiQC runs.☆97Updated 5 months ago