ddbj / human-reseq
☆11Updated 2 years ago
Alternatives and similar repositories for human-reseq:
Users that are interested in human-reseq are comparing it to the libraries listed below
- Common Workflow Language definition files for workflows introduced in DAT2☆11Updated 2 years ago
- RNAseq pipeline centered on Salmon☆27Updated 2 months ago
- ☆32Updated this week
- About Workflow related meetup☆14Updated last month
- ☆13Updated 7 months ago
- Structural variant pipeline☆17Updated 4 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆19Updated 2 years ago
- Modular Multi-scale Integrated Genome Graph Browser☆88Updated 2 months ago
- An approximate sequence pattern matcher for FASTQ/FASTA files.☆30Updated 9 years ago
- Viola is a flexible and powerful python package designed specifically for analysis of genomic structural variant (SV) signatures.☆26Updated 6 months ago
- Common Workflow Language tools and workflows by Pitagora-Network☆33Updated 2 years ago
- ☆15Updated 6 years ago
- RDF and SPARQL ideas to build on top of [odgi](https://github.com/pangenome/odgi)☆11Updated 10 months ago
- Whole Genome Sequenceing Structural Variation Pipelines☆16Updated 5 years ago
- Web app for automated, systematic, and integrated RNA-seq differential expression analysis☆13Updated last month
- Genome Annotation Library - A perl toolkit for working with SO compliant genome annotations☆17Updated 2 years ago
- Open-source opinionated Galaxy-based framework for microbiota analysis☆14Updated 4 years ago
- Whole Exome/Whole Genome Sequencing alignment pipeline☆28Updated 4 months ago
- Assembly Based ReAligner☆72Updated 6 years ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆30Updated last year
- detection of mutations causing splicing change☆13Updated 2 years ago
- Git repo for Bio::HTS module on CPAN, providing Perl links into HTSlib☆24Updated 3 weeks ago
- A method to identify structural variation from sequencing data in target regions☆31Updated 4 years ago
- ☆30Updated 3 years ago
- ☆13Updated 6 years ago
- Accumulating container resource usage with workflow metadata☆19Updated 3 years ago
- sort genomic data☆35Updated 4 years ago
- Fast-SG: An alignment-free algorithm for ultrafast scaffolding graph construction from short or long reads.☆22Updated 6 years ago
- Find Unique genomic Regions☆29Updated 3 weeks ago
- ☆14Updated last year