Alternatives and similar repositories for human-reseq

Users that are interested in human-reseq are comparing it to the libraries listed below

• workflow-meetup-jp / workflow-meetup
  About Workflow related meetup
  ☆14Updated last year
• yachielab / SPADE
  ☆15Updated 2 years ago
• pitagora-network / DAT2-cwl
  Common Workflow Language definition files for workflows introduced in DAT2
  ☆11Updated 3 years ago
• rikenbit / ramdaq
  ☆13Updated 3 months ago
• yyoshiaki / ikra
  RNAseq pipeline centered on Salmon
  ☆29Updated last year
• MoMI-G / MoMI-G
  Modular Multi-scale Integrated Genome Graph Browser
  ☆92Updated 3 months ago
• sanger-pathogens / pymummer
  Python3 module for running MUMmer and reading the output
  ☆33Updated 8 months ago
• Kan-E / RNAseqChef
  Web app for automated, systematic, and integrated RNA-seq differential expression analysis
  ☆15Updated 3 weeks ago
• Pfern / PANGenomics
  ☆15Updated 7 years ago
• ncbi / pipelines
  ☆13Updated 7 years ago
• yachielab / FRACTAL
  FRACTAL: framework for distributed computing to trace large accurate lineages
  ☆24Updated 3 years ago
• SciLifeLab / TIDDIT
  TIDDIT - structural variant calling
  ☆77Updated 7 months ago
• pinellolab / CRISPRitz
  Tool package to perform in-silico CRISPR analysis and assessment
  ☆34Updated 2 weeks ago
• yyoshiaki / VIRTUS
  A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.
  ☆36Updated 3 years ago
• jwintersinger / kablammo
  Interactive, web-based BLAST results visualization tool. Accessible at https://kablammo.wasmuthlab.org.
  ☆65Updated 3 years ago
• PacificBiosciences / pbAA
  ☆27Updated 9 months ago
• linsalrob / SRA_Metadata
  Get, parse, and extract information from the SRA metadata files
  ☆45Updated 3 years ago
• IARCbioinfo / alignment-nf
  Whole Exome/Whole Genome Sequencing alignment pipeline
  ☆28Updated last year
• nf-core / rnavar
  gatk4 RNA variant calling pipeline
  ☆55Updated this week
• roryk / tiny-test-data
  Super small biological datasets for unit testing
  ☆62Updated 6 years ago
• SamStudio8 / majora2
  Malleable All-seeing Journal Of Research Artifacts
  ☆35Updated 2 years ago
• EvolBioInf / fur
  Find Unique genomic Regions
  ☆32Updated last month
• AlgoLab / galig
  A graph aligner
  ☆29Updated last year
• Illumina / witty.er
  What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.
  ☆34Updated 2 years ago
• brentp / cigar
  simple library for dealing with SAM cigar strings
  ☆41Updated 4 years ago
• kamimrcht / REINDEER
  REINDEER REad Index for abuNDancE quERy
  ☆56Updated 5 months ago
• telatin / covtobed
  ⛰ covtobed | Convert the coverage track from a BAM file into a BED file
  ☆44Updated last month
• scottgigante / picopore
  A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information
  ☆30Updated last year
• nf-core / multiplesequencealign
  A pipeline to run and systematically evaluate Multiple Sequence Alignment (MSA) methods.
  ☆39Updated 2 weeks ago
• PacificBiosciences / pbcore
  A Python library for reading and writing PacBio® data files
  ☆41Updated last month