Alternatives and similar repositories for human-reseq:

Users that are interested in human-reseq are comparing it to the libraries listed below

• pitagora-network / DAT2-cwl
  Common Workflow Language definition files for workflows introduced in DAT2
  ☆11Updated 2 years ago
• rikenbit / ramdaq
  ☆13Updated last month
• yyoshiaki / ikra
  RNAseq pipeline centered on Salmon
  ☆27Updated 4 months ago
• dbcls / Togothon
  ☆32Updated last week
• suimye / cage_tutorial
  Step by step tutorial for CAGE analysis
  ☆9Updated 3 years ago
• Pfern / PANGenomics
  ☆15Updated 7 years ago
• J35P312 / FindSV
  Structural variant pipeline
  ☆17Updated 4 years ago
• yachielab / FRACTAL
  FRACTAL: framework for distributed computing to trace large accurate lineages
  ☆24Updated 2 years ago
• Kan-E / RNAseqChef
  Web app for automated, systematic, and integrated RNA-seq differential expression analysis
  ☆14Updated 3 months ago
• yachielab / SPADE
  ☆14Updated 2 years ago
• dermasugita / Viola-SV
  Viola is a flexible and powerful python package designed specifically for analysis of genomic structural variant (SV) signatures.
  ☆26Updated 8 months ago
• MoMI-G / MoMI-G
  Modular Multi-scale Integrated Genome Graph Browser
  ☆90Updated 5 months ago
• workflow-meetup-jp / workflow-meetup
  About Workflow related meetup
  ☆14Updated 4 months ago
• IARCbioinfo / alignment-nf
  Whole Exome/Whole Genome Sequencing alignment pipeline
  ☆28Updated 6 months ago
• ASaiM / framework
  Open-source opinionated Galaxy-based framework for microbiota analysis
  ☆14Updated 4 years ago
• friend1ws / SAVNet
  detection of mutations causing splicing change
  ☆13Updated 2 years ago
• ccgd-profile / BreaKmer
  A method to identify structural variation from sequencing data in target regions
  ☆31Updated 4 years ago
• vibansal / hapcut
  program for haplotype phasing from sequence reads and related tools
  ☆25Updated 6 years ago
• monarch-initiative / Squirls
  Interpretable prioritization of splice variants in diagnostic next-generation sequencing
  ☆16Updated 10 months ago
• isugifNF / GATK-flow
  Nextflow implementation of the GATK HaplotypeCaller pipeline
  ☆13Updated last week
• PacificBiosciences / pbcore
  A Python library for reading and writing PacBio® data files
  ☆39Updated last month
• galantelab / sandy
  A straightforward and complete next-generation sequencing read simulator
  ☆21Updated last year
• meso-cacase / GGGenome
  塩基配列を高速に検索するウェブサービス
  ☆18Updated 2 months ago
• NBISweden / wgs-structvar
  Whole Genome Sequenceing Structural Variation Pipelines
  ☆16Updated 6 years ago
• yyoshiaki / VIRTUS
  A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.
  ☆34Updated 3 years ago
• genome-sci / python_bioinfo_2022
  ☆11Updated 2 years ago
• indraniel / fqgrep
  An approximate sequence pattern matcher for FASTQ/FASTA files.
  ☆30Updated 9 years ago
• inutano / cwl-metrics
  Accumulating container resource usage with workflow metadata
  ☆19Updated 4 years ago
• ZuchnerLab / Maverick
  A Mendelian approach to variant effect prediction built in keras
  ☆17Updated 5 months ago
• kensung-lab / INSurVeyor
  An insertion caller for Illumina paired-end WGS data.
  ☆23Updated 8 months ago