Alternatives and similar repositories for DAT2-cwl

Users that are interested in DAT2-cwl are comparing it to the libraries listed below

• sapporo-wes / sapporo
  A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…
  ☆21Updated 3 years ago
• ddbj / human-reseq
  ☆11Updated 3 years ago
• workflow-meetup-jp / workflow-meetup
  About Workflow related meetup
  ☆14Updated last year
• dbcls / Togothon
  ☆33Updated 3 weeks ago
• MoMI-G / MoMI-G
  Modular Multi-scale Integrated Genome Graph Browser
  ☆92Updated 3 months ago
• sapporo-wes / sapporo-service
  A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…
  ☆24Updated 4 months ago
• yyoshiaki / ikra
  RNAseq pipeline centered on Salmon
  ☆29Updated last year
• inutano / cwl-metrics
  Accumulating container resource usage with workflow metadata
  ☆19Updated 4 years ago
• seppinho / mutserve
  mtDNA Variant Caller
  ☆35Updated 11 months ago
• sapporo-wes / tonkaz
  CLI tool to verify workflow reproducibility
  ☆16Updated last year
• Kan-E / RNAseqChef
  Web app for automated, systematic, and integrated RNA-seq differential expression analysis
  ☆15Updated last month
• pitagora-network / pitagora-cwl
  Common Workflow Language tools and workflows by Pitagora-Network
  ☆33Updated 3 years ago
• roryk / tiny-test-data
  Super small biological datasets for unit testing
  ☆62Updated 6 years ago
• common-workflow-library / bio-cwl-tools
  CWL CommandLineTool descriptions for biology/life-sciences related applications
  ☆79Updated 8 months ago
• common-workflow-lab / wdl2cwl
  [Experimental] Workflow Definition Language (WDL) to CWL
  ☆28Updated 4 years ago
• charite / jannovar
  Annotation of VCF variants with functional impact and from databases (executable+library)
  ☆63Updated last week
• PMCC-BioinformaticsCore / janis
  [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
  ☆44Updated 2 years ago
• rikenbit / ramdaq
  ☆13Updated 3 months ago
• The-Sequence-Ontology / SO-Ontologies
  Collect of SO Ontologies
  ☆102Updated 3 months ago
• fagostini / RADICL_analysis
  Minimal scripts to reproduce the RADICL-seq analysis of the Nature Communications manuscript
  ☆11Updated 5 years ago
• BioContainers / multi-package-containers
  Testing building mulled containers for multi-requirement tools.
  ☆80Updated 3 weeks ago
• broadinstitute / wdl
  Workflow Description Language - Specification and Implementations
  ☆27Updated 6 years ago
• yyoshiaki / VIRTUS
  A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.
  ☆36Updated 3 years ago
• yachielab / FRACTAL
  FRACTAL: framework for distributed computing to trace large accurate lineages
  ☆24Updated 3 years ago
• ocxtal / minialign
  [IMPORTANT: not for real data analysis, only for algorithm evaluation] fast and accurate alignment tool for PacBio and Nanopore long read…
  ☆125Updated 7 years ago
• igvteam / igv-notebook
  Module for embedding igv.js in an IPython notebook
  ☆80Updated 10 months ago
• galaxyproject / planemo
  Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…
  ☆95Updated 2 weeks ago
• biowdl / tasks
  A collection of reusable WDL tasks. Category:Other
  ☆88Updated this week
• nvictus / pybbi
  Python bindings to UCSC BigWig and BigBed library
  ☆35Updated this week
• GooglingTheCancerGenome / sv-callers
  Snakemake-based workflow for detecting structural variants in genomic data
  ☆80Updated 10 months ago