python wrapper to dpryan79's bigwig library using cffi
☆19May 13, 2016Updated 9 years ago
Alternatives and similar repositories for bw-python
Users that are interested in bw-python are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A C library for handling bigWig files☆81Jan 17, 2025Updated last year
- ☆10Dec 12, 2017Updated 8 years ago
- Manage the visualization of large amounts of other people's [often messy] genomics data☆18Apr 10, 2016Updated 9 years ago
- Shape analysis of high-throughput data☆19Feb 24, 2016Updated 10 years ago
- A tool for Read Multi-Mapper Resolution☆24Feb 15, 2017Updated 9 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Hotspot is a program for identifying genomic regions of local enrichment of short-read sequence tags.☆16Apr 12, 2014Updated 11 years ago
- Python wrapper around the popular ChIP-Seq peak caller SICER☆15Dec 7, 2017Updated 8 years ago
- A python extension for quick access to bigWig and bigBed files☆242Jan 14, 2026Updated 2 months ago
- Request for comments on interchangeable bioinformatics containers☆39Jun 18, 2019Updated 6 years ago
- Python wrapper for MaxEntScan to calculate splice site strength.☆18Jul 8, 2022Updated 3 years ago
- XL-mHG: A Semiparametric Test for Enrichment in Ranked Lists.☆13Jan 19, 2023Updated 3 years ago
- conda recipes for genomic data☆84Jul 31, 2021Updated 4 years ago
- IDR☆175Sep 18, 2018Updated 7 years ago
- Snakemake library for bioinformatics programs, with a focus on next-generation sequencing☆22Feb 4, 2016Updated 10 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Oct 29, 2018Updated 7 years ago
- Python bindings to UCSC BigWig and BigBed library☆36Updated this week
- Efficient handling of FASTQ files from Python☆51Nov 28, 2025Updated 4 months ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11Oct 8, 2021Updated 4 years ago
- Tandem Repeat Annotation Library☆25Mar 30, 2023Updated 3 years ago
- Python-based UCSC genome browser snapshot-taker and gallery-maker☆12May 21, 2024Updated last year
- fast easy interval overlapping for nim-lang☆29Jul 9, 2025Updated 9 months ago
- Estimate linkage disequilibrium between unphased loci☆11Jun 9, 2015Updated 10 years ago
- The D4 Quantitative Data Format☆171Nov 28, 2025Updated 4 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- GO enrichment with python -- pandas meets networkx☆88Jul 15, 2020Updated 5 years ago
- ChromDiff program as described in Yen and Kellis, Nature Communications 2015.☆14May 12, 2016Updated 9 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Jun 16, 2024Updated last year
- ☆16Jan 2, 2024Updated 2 years ago
- Subset of Galaxy (http://galaxyproject.org/) core code designed to be used as a library.☆12Jul 22, 2020Updated 5 years ago
- Python package for common tasks in bioinformatic.☆12Sep 24, 2025Updated 6 months ago
- Log command line events to a graph database :)☆13Mar 12, 2016Updated 10 years ago
- A versatile and efficient RNA-Seq read counting tool☆16Mar 30, 2016Updated 10 years ago
- Moderator Templates for https://www.biostars.org/☆11Apr 15, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- A platform for World Wide Computing☆65Apr 16, 2015Updated 10 years ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Nov 5, 2022Updated 3 years ago
- Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline☆26Oct 5, 2015Updated 10 years ago
- k-mer Counter based on Multiple Burst Trees (multi-threaded)☆13Aug 31, 2016Updated 9 years ago
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆43Jul 6, 2021Updated 4 years ago
- Simple interface to BioMart (Python -> rpy2 -> R/BioConductor's biomaRt)☆16May 21, 2014Updated 11 years ago
- A lightweight library for working with PAF (Pairwise mApping Format) files☆30May 3, 2022Updated 3 years ago