Novartis / railroadtracks
Railroadtracks is a Python package to handle connected computation steps for DNA and RNA Seq.
☆14Updated 9 years ago
Alternatives and similar repositories for railroadtracks:
Users that are interested in railroadtracks are comparing it to the libraries listed below
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆33Updated 3 months ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 7 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Galaxy Github repository BETA 1. May be destroyed and recreated if post-conversion problems are found (but post-conversion commits on thi…☆12Updated 10 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- Stupid Simple Elastic Compute Cloud☆16Updated last year
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- robust matching of small variant datasets using flexible scoring schemes☆10Updated 4 years ago
- NExt generation Analysis Toolbox☆14Updated 9 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated last week
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆24Updated 7 years ago
- ☆15Updated 9 years ago
- R function to plot high quality, elegant heatmap using 'ggplot2' graphics . Some of the important features of this package are, colorin…☆11Updated 8 years ago
- Biological Graphic tool in Python☆34Updated 4 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated 7 months ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated 3 months ago
- A collection of well-known bioinformatics programs.☆25Updated 9 years ago
- ☆37Updated 4 years ago
- An algorithm for clonal tree reconstruction from multi-sample cancer sequencing data☆14Updated 6 years ago
- variant integration methods for the 1000 Genomes Project☆21Updated 7 years ago
- GenoTypes Compressor☆15Updated 2 years ago
- A client for the Ensembl REST API written in the Python programming language☆26Updated 3 months ago
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Updated 5 years ago
- vcf file manipulation☆21Updated 9 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- ☆24Updated 4 years ago
- Integrative visualization of multiple omic datasets onto KEGG pathways.☆11Updated 3 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Updated 8 years ago
- A python script used to annotate genomic intervals.☆18Updated 4 years ago
- ☆13Updated 7 years ago