GenomiqueENS / aozanLinks
An automated post sequencing data processing pipeline for Illumina HiSeq
☆14Updated last week
Alternatives and similar repositories for aozan
Users that are interested in aozan are comparing it to the libraries listed below
Sorting:
- Minor Variant Calling and Phasing Tools☆15Updated 3 years ago
- Generate unique KMERs for every contig in a FASTA file☆48Updated 2 years ago
- ☆28Updated 3 years ago
- Find Unique genomic Regions☆30Updated 2 months ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 6 years ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- full taxonomer cython repository☆22Updated 5 years ago
- ☆26Updated 5 years ago
- Various scripts and recipes for working with nanopore data☆34Updated 9 years ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Whole Exome/Whole Genome Sequencing alignment pipeline☆28Updated 9 months ago
- ☆48Updated last year
- 🍶 Genome assembly with short sequence reads☆25Updated last year
- A method of assessing sequence complexity based on kmer frequencies☆32Updated 7 years ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆57Updated 4 years ago
- This program dereplicates and/or filter nucleotide and/or protein database from a list of names or sequences (by exact match).☆15Updated 6 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 5 years ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆32Updated last year
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated last year
- A simple tool to fix PacBio fasta/q that was not properly split into subreads☆15Updated 4 years ago
- An insertion caller for Illumina paired-end WGS data.☆23Updated 10 months ago
- Remove lambda phage reads from a fastq file☆29Updated 2 years ago
- Miscellaneous scripts for applications of PacBio systems☆27Updated 3 years ago
- Output FASTQ summary statistics in JSON format☆30Updated 2 years ago
- ☆12Updated 3 months ago
- My collection of light bioinformatics analysis pipelines for specific tasks☆75Updated last year
- Tools for detecting DNA modifications from single molecule, real-time sequencing data☆25Updated 3 years ago
- A pipeline to identify (and remove) certain sequences from raw genomic data. Default taxon to identify (and remove) is Homo sapiens. Remo…☆20Updated 2 weeks ago
- Scripts for implementing read until and other examples.☆31Updated 5 years ago