ga4gh / task-execution-serverLinks
☆11Updated 8 years ago
Alternatives and similar repositories for task-execution-server
Users that are interested in task-execution-server are comparing it to the libraries listed below
Sorting:
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- APIs for discovering genomics tools, their metadata and their containers☆31Updated 8 months ago
- normalize, left-align, trim, validate and clean VCF files☆20Updated 9 years ago
- Convert CWL to WDL☆17Updated 8 years ago
- Docker images of bioinformatics software☆21Updated 8 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago
- utilities for indexing and sequence extraction from FASTA files☆59Updated 4 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 6 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Updated 9 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Updated 8 years ago
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆36Updated last month
- Python client for GA4GH htsget protocol☆15Updated 2 years ago
- Snakemake library for bioinformatics programs, with a focus on next-generation sequencing☆22Updated 9 years ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated 2 years ago
- ☆37Updated 4 years ago
- Automated CWL and Galaxy XML generation for Python tools that use argparse and click☆11Updated 5 years ago
- robust matching of small variant datasets using flexible scoring schemes☆11Updated 5 years ago
- A fast Python library for VCF files leveraging Cython for speed.☆52Updated 7 years ago
- The gkno launcher for executing tools or pipelines☆31Updated 8 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- succinct labeled graphs with collections and paths☆15Updated 6 years ago
- Analysis Framework for Biological Data from High Throughput Experiments☆34Updated 8 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Using reference-free compressed data structures to analyse thousands of human genomes (1000 Genomes ReadServer)☆14Updated 7 years ago
- a pileup library that embraces the huge☆43Updated 4 years ago
- reference free variant assembly☆33Updated 2 years ago
- conda recipes for genomic data☆85Updated 3 years ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- cache packages permanently☆14Updated last year
- [Bio in Docker] Symposium 2015☆21Updated 7 years ago