SaskiaFreytag / schexLinks
☆75Updated last year
Alternatives and similar repositories for schex
Users that are interested in schex are comparing it to the libraries listed below
Sorting:
- Clone of the Bioconductor repository for the basilisk package.☆29Updated 2 months ago
- ☆96Updated last year
- Explore design matrices interactively with R/Shiny☆38Updated 2 months ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆69Updated last month
- Fast algorithms for fitting topic models and non-negative matrix factorizations to count data.☆84Updated 3 weeks ago
- Visualize Cytometry data with ggplot2☆63Updated 2 weeks ago
- An R package for multivariate adaptive shrinkage.☆91Updated last year
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Updated 2 years ago
- MSigDB gene sets for multiple organisms in a tidy data format☆84Updated 5 months ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆80Updated last month
- Brings SingleCellExperiment objects to the tidyverse☆36Updated 2 months ago
- Bioconductor package for management of multi-assay data☆74Updated 2 months ago
- See https://github.com/LTLA/SingleRBook for the latest version of this content.☆12Updated 3 years ago
- Demonstration of the use of an R package to organize a data analysis project☆22Updated 5 years ago
- Automate package and project setup for Bioconductor packages☆54Updated 9 months ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated 4 months ago
- Exploring dimension-reduced embeddings☆111Updated 3 years ago
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- Visualising single-cell trajectories, including comparisons between two models 📈☆32Updated 4 years ago
- Interactive Cytometry Data Analysis☆67Updated last month
- flowWorkspace☆46Updated 2 weeks ago
- Bioconductor facilities for parallel evaluation☆69Updated 2 months ago
- Brings SummarizedExperiment to the tidyverse☆29Updated 3 weeks ago
- A Grammar of Data Manipulation for Omics Data☆21Updated 5 years ago
- An introduction to matrix factorization and PCA and SVD.☆41Updated 2 years ago
- pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data☆56Updated last month
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆25Updated 2 years ago
- Visualise correlation results and test significancies of these☆24Updated 5 years ago
- Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).☆22Updated last year