veltenlab / rnamagnetLinks
☆25Updated 4 months ago
Alternatives and similar repositories for rnamagnet
Users that are interested in rnamagnet are comparing it to the libraries listed below
Sorting:
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- R package for robust clustering of single cell RNA sequencing data☆36Updated last year
- Single-cell Case Control Analysis☆52Updated last week
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆21Updated 2 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- scWGCNA☆61Updated 3 years ago
- ☆41Updated 4 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 4 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- ☆43Updated 4 years ago
- ☆34Updated 6 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆93Updated 7 months ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆90Updated 2 weeks ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆44Updated 3 years ago
- ☆47Updated 5 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆46Updated 4 years ago
- SCDC☆45Updated 6 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆30Updated 2 years ago
- ☆39Updated 4 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated 3 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆25Updated 5 years ago
- ☆32Updated 11 months ago
- Downstream analysis script for sci-fate (TF-gene linkage analysis / cell linkage analysis)☆24Updated 5 years ago