veltenlab / rnamagnetLinks
☆25Updated 2 months ago
Alternatives and similar repositories for rnamagnet
Users that are interested in rnamagnet are comparing it to the libraries listed below
Sorting:
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- R package for robust clustering of single cell RNA sequencing data☆35Updated last year
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- Single-cell Case Control Analysis☆52Updated this week
- Scripts needed to generate the figures for the Monocle 2 paper (Qiu et al, 2017)☆29Updated 5 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- ☆47Updated 5 years ago
- scWGCNA☆61Updated 2 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆43Updated 3 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆21Updated 2 years ago
- Identify genes with spatial expression trends in single-cell gene expression data☆50Updated 7 years ago
- ☆51Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated last year
- Gene regulatory network containing signed transcription factor-target gene interactions☆87Updated 4 months ago
- SCDC☆45Updated 3 months ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- Clone of the Bioconductor repository for the scran package.☆44Updated last year
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 4 years ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆55Updated 4 months ago
- ☆43Updated 4 years ago
- ☆41Updated 4 years ago
- scRNA-seq cell type identification☆43Updated 6 years ago
- Analysis code for "Perturbation-response genes reveal signaling footprints in cancer gene expression"☆20Updated 7 years ago
- ☆34Updated 6 years ago