WWXkenmo / ICAnetLinks
Independent Component Analysis decipher functional modules for better cell clustering and annotation
☆17Updated 3 years ago
Alternatives and similar repositories for ICAnet
Users that are interested in ICAnet are comparing it to the libraries listed below
Sorting:
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated 11 months ago
- Ordering gene-expression and functional events in single-cell experiments☆24Updated last year
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆41Updated last month
- Lung cancer 10X analysis☆11Updated 4 years ago
- ☆10Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 10 months ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆27Updated 4 years ago
- Calculation of Reference/Cluster Similarity Spectrum (RSS/CSS)☆35Updated last year
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆22Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆38Updated 4 years ago
- ☆24Updated 2 years ago
- NicheDE is a method that detects context dependent changes in gene expression in spatial transcriptomic data.☆20Updated 3 months ago
- ☆20Updated 2 months ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…