raphael-group / DeST_OTLinks
Developmental Spatiotemporal Optimal Transport
☆11Updated 2 months ago
Alternatives and similar repositories for DeST_OT
Users that are interested in DeST_OT are comparing it to the libraries listed below
Sorting:
- CAST package☆40Updated 7 months ago
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆35Updated 4 months ago
- Inferring cell-cell interactions from pseudotime ordering of scRNA-Seq data☆25Updated 2 years ago
- Test genes for Spatial Variation☆14Updated 5 months ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments v.2☆34Updated 3 months ago
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆13Updated last year
- Spatial Single Cell transcriptomic library☆17Updated 4 months ago
- UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference☆26Updated 6 months ago
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆35Updated last month
- MARIO: single-cell proteomic data matching and integration using both shared and distinct features☆23Updated last year
- SPatial INtegration of spatially resolved transcriptomics datasets☆17Updated 2 months ago
- ☆48Updated 2 weeks ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆14Updated last year
- ESICCC: A systematic computational framework for evaluation, selection and integration of cell-cell communication inference methods☆12Updated last year
- Data analysis for the moscot-framework project☆12Updated 5 months ago
- ☆28Updated 3 months ago
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆31Updated last month
- Spatial direct messaging detected by bivariate Moran☆26Updated last month
- Bayesian Analytics for Spatial Segmentation☆28Updated last month
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 3 months ago
- ☆13Updated 2 years ago
- scTM: A package for topic modelling in transcriptomics data☆20Updated last year
- Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information☆21Updated 2 years ago
- ☆21Updated 3 years ago
- ☆20Updated 2 weeks ago
- Spatial Transcriptomics Algorithm Reconstructing Copy-number Heterogeneity☆27Updated 10 months ago
- ☆26Updated last year
- ☆28Updated 3 months ago
- Neural Crest Fate Decisions☆10Updated 5 years ago
- ☆24Updated last year