Implementation of gene-level rare coding variant association tests targeting allelic series: cases where increasingly deleterious mutations have increasingly large phenotypic effects.
☆14Oct 22, 2025Updated last year
Alternatives and similar repositories for AllelicSeries
Users that are interested in AllelicSeries are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Nov 1, 2022Updated 4 years ago
- Mixed-effect model to test differences in cell type proportions from single-cell data, in Python☆10Aug 6, 2026Updated 2 months ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆27Sep 2, 2021Updated 5 years ago
- Spectral and reproducibility analysis of Hi-C contact maps☆13Mar 18, 2021Updated 5 years ago
- EmbedGEM: A framework to evaluate the utility of embeddings for genetic discovery☆23Oct 3, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆18Sep 14, 2023Updated 3 years ago
- VCF compression tool☆10Jun 24, 2024Updated 2 years ago
- This guidance creates a scalable environment in AWS to prepare genomic, clinical, mutation, expression and imaging data for large-scale a…☆25Jun 30, 2025Updated last year
- Calculate position-dependent diffusivity functions from trajectory data (usually from molecular dynamics). The approach is described in h…☆11Mar 25, 2025Updated last year
- ldshrink: a one-stop R package for shrinkage estimation of linkage disequilibrium☆13Mar 31, 2021Updated 5 years ago
- ☆11Aug 4, 2026Updated 2 months ago
- Pattern Analysis of SpaTial omics datA☆13Jun 13, 2025Updated last year
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated 2 years ago
- VCF file compressor reaching over 30-fold efficiency on massive genotype datasets, with processing speeds up to 100 MB/s and peak memory …☆19Oct 5, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Dockerfiles for portable shiny apps☆10Dec 10, 2019Updated 6 years ago
- Channel Vision Transformers: An Image Is Worth C x 16 x 16 Words☆74Feb 22, 2024Updated 2 years ago
- ☆36Sep 7, 2026Updated last month
- XReason - formal reasoning about explanations for ML models☆18Sep 8, 2026Updated last month
- Vector Approximate Message Passing inference framework for GWAS☆21Jun 12, 2026Updated 4 months ago
- Marker gene profile estimation method used in NeuroExpresso manuscript☆14Jul 11, 2019Updated 7 years ago
- R plugin for Sublime Text 2☆14Oct 27, 2013Updated 13 years ago
- Helper functions to use knitr as a lab notebook☆13Jan 4, 2013Updated 13 years ago
- A Python package for unsupervised analysis of spatial (prote)omics data.☆19Oct 26, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Sample representation benchmark for single-cell data☆15Jun 12, 2026Updated 4 months ago
- ☆19Sep 24, 2024Updated 2 years ago
- ☆10Feb 3, 2022Updated 4 years ago
- Python package to interactively annotate histological images within a jupyter notebook☆19Oct 20, 2025Updated last year
- Single-cell differential expression☆22Oct 18, 2026Updated 2 weeks ago
- Cache the return values of your Python functions with a simple decorator.☆11Jan 17, 2017Updated 9 years ago
- A library for history/provenance tracking in web-based visualizations.☆23Jan 31, 2023Updated 3 years ago
- Enhanced stain normalization for histopathology images with batch processing support. Optimized for CPU, GPU (CUDA), and MPS (Apple Silic…☆26Aug 9, 2026Updated 2 months ago
- a minimal, scriptable genome browser for python☆54Dec 20, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- k-NN-based mapping of cells across representations to transfer labels, embeddings, and expression values.☆18Updated this week
- Genomic Features in Python from BioConductor's AnnotationHub☆22Updated this week
- ☆31Updated this week
- ☆13Feb 21, 2025Updated last year
- Repo for distillation of chemical knowledge into python code☆13Sep 28, 2026Updated last month
- Jupyter Notebooks and other code for 4CE data visualizations.☆14Jan 25, 2023Updated 3 years ago
- R package to provide data access to OpenAlex by way of REST API☆12Sep 1, 2026Updated 2 months ago