☆40Feb 24, 2026Updated 4 months ago
Alternatives and similar repositories for prophet
Users that are interested in prophet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools for sgRNA calling in direct capture Perturb-seq data☆41Jun 18, 2023Updated 3 years ago
- A tutorial on how to create bioinformatics pipelines as bash scripts, Makefiles and using tools like Nextflow.☆17Nov 14, 2022Updated 3 years ago
- Shadow objects for AnnData and MuData (experimental)☆11Feb 28, 2025Updated last year
- Light-weight Jupyter notebook tracker.☆34Apr 30, 2025Updated last year
- Models and datasets for perturbational single-cell omics☆179Aug 19, 2022Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Public Codebase supporting the paper "Modeling Cellular Perturbations with The Sparse Additive Mechanism Shift Variational Autoencoder" b…☆15Oct 20, 2023Updated 2 years ago
- Search- and quantification-engine agnostic biological interpretation of proteomics data☆25Updated this week
- Distributed single-cell data analysis.☆40Updated this week
- Single-cell perturbation analysis☆338Updated this week
- parallel differential expression for single-cell perturbation sequencing☆25Updated this week
- NHC: A computational approach to detect physiological homogeneity in the midst of genetic heterogeneity☆12Feb 25, 2026Updated 4 months ago
- single cell foundation model for Gene network inference and more☆20May 20, 2026Updated 2 months ago
- Conditional out-of-distribution prediction☆64Aug 2, 2024Updated last year
- Implementation of gene-level rare coding variant association tests targeting allelic series: cases where increasingly deleterious mutatio…☆14Oct 22, 2025Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Image-based Profiling Handbook☆11Apr 15, 2025Updated last year
- Swift Phenotypic Analysis of Cells☆10Jun 8, 2025Updated last year
- a dataloader to work with large single cell datasets from lamindb☆41May 20, 2026Updated 2 months ago
- Minibatch loading for on-disk anndata files, co-developed by Lamin Labs and scverse☆67Jul 14, 2026Updated last week
- protein backbone refinement☆15Sep 12, 2024Updated last year
- Developmental Spatiotemporal Optimal Transport☆14Mar 19, 2025Updated last year
- scPortrait is a scalable toolkit to generate single-cell representations from raw microscopy images☆109Jul 13, 2026Updated last week
- R package to infer multicellular programs from single-cell data using multi-omics factor analysis (MOFA)☆15Aug 17, 2023Updated 2 years ago
- A repository for the design and analysis of pooled single cell RNA-seq perturbation experiments.☆98Jul 31, 2019Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆70Jul 21, 2023Updated 3 years ago
- Code for paper: "Removing Biases from Molecular Representations via Information Maximization"☆21Apr 4, 2024Updated 2 years ago
- Conditional Monge Gap (2026; Nature Machine Intelligence)☆17Jun 25, 2026Updated 3 weeks ago
- ☆89Feb 17, 2026Updated 5 months ago
- Multi-omics factor analysis v2☆66May 21, 2026Updated 2 months ago
- R package that performs sparse factor analysis and differential gene expression discovery simultaneously on single-cell CRISPR screening …☆25Oct 3, 2023Updated 2 years ago
- CellVerse: Do Large Language Models Really Understand Cell Biology?☆16May 14, 2025Updated last year
- Seven Bridges Genomics aligner/caller debugging and analysis tools☆13Nov 20, 2018Updated 7 years ago
- A CodecPipeline for zarr-python backed by the zarrs Rust crate☆72Jul 14, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆34Updated this week
- Learning meaningful representations of genes☆21Jul 7, 2025Updated last year
- Graph-linked unified embedding for single-cell multi-omics data integration☆471Feb 9, 2026Updated 5 months ago
- Machine learning methods for DNA sequence analysis.☆64Jun 10, 2026Updated last month
- BioDiscoveryAgent is an LLM-based AI agent for closed-loop design of genetic perturbation experiments☆114Jul 6, 2025Updated last year
- Open-source foundation models for multi-omics representation learning☆40Jun 3, 2026Updated last month
- pytorch dataloaders for single-cell perturbation data☆47Updated this week