AlexsLemonade / RNA-Seq-ExercisesLinks
Exercises for training scientists to perform some RNA-seq analyses.
☆11Updated 5 years ago
Alternatives and similar repositories for RNA-Seq-Exercises
Users that are interested in RNA-Seq-Exercises are comparing it to the libraries listed below
Sorting:
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- Machine Learning to Detect Cancer Biomarkers from RNAseq Data☆34Updated 6 years ago
- GEO RNA-seq Experiments Processing Pipeline☆21Updated 5 years ago
- Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆47Updated 3 years ago
- iS-CellR: interactive graphical tool for analysis of single-cell RNAseq data☆24Updated 5 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆43Updated 3 years ago
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes☆23Updated 7 months ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆14Updated 3 months ago
- Tools for visualizing genomics data☆69Updated 3 years ago
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆14Updated 4 years ago
- RNA-seq data comprehensive data analysis toolbox☆19Updated 2 years ago
- Machine learning use cases for teaching☆13Updated 8 years ago
- a R package to identify neoantigens from NGS data☆19Updated 8 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- Analysis for svaseq paper☆19Updated 11 years ago
- Materials presented at the BiocNYC meet-up☆12Updated 6 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆25Updated last year
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆14Updated this week
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆26Updated 9 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- Client to access ExperimentHub resources☆11Updated last month
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Updated 7 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- Clonal reconstruction from HTS data☆10Updated 3 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 3 months ago