poruloh / Eagle
Haplotype phasing software
☆65Updated 4 years ago
Alternatives and similar repositories for Eagle:
Users that are interested in Eagle are comparing it to the libraries listed below
- ☆60Updated last year
- Minimac3 is a low memory and computationally efficient implementation of the genotype imputation algorithms. Minimac3 is designed to hand…☆29Updated 2 years ago
- MOsaic CHromosomal Alterations (MoChA) caller☆83Updated last week
- Rare variant test software for next generation sequencing data☆137Updated 3 years ago
- phasing and Allele Specific Expression from RNA-seq☆111Updated 7 months ago
- RFMIX - Local Ancestry and Admixture Inference Version 2☆82Updated 2 years ago
- ☆96Updated 2 years ago
- ☆40Updated 7 years ago
- ☆78Updated 10 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆48Updated 5 years ago
- Very simple, pure python, BAM file reader☆79Updated 6 years ago
- Tools to work with GWAS-VCF summary statistics files☆113Updated 4 months ago
- Sanity check Variant Call Format (VCF) files.☆37Updated 8 years ago
- Michigan Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves u…☆80Updated 4 months ago
- A factor analysis package☆98Updated 12 years ago
- Battenberg algorithm and associated implementation script☆52Updated 4 years ago
- Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer☆96Updated 3 years ago
- Quality of RNA-Seq Toolset☆52Updated 5 years ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆49Updated 6 years ago
- R package designed to simplify structural variant analysis☆72Updated 3 years ago
- Ancestry and Kinship Tools☆70Updated 2 years ago
- WASP: allele-specific pipeline for unbiased read mapping and molecular QTL discovery☆103Updated 3 years ago
- ABRA2☆92Updated 2 years ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆76Updated 2 months ago
- ☆25Updated 8 months ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 5 years ago
- Genome-wide imputation pipeline☆31Updated 6 months ago
- Read visualizer for structural variants☆81Updated 6 years ago
- BISulfite-seq CUI Toolkit☆65Updated last month
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆46Updated this week