☆17Oct 16, 2017Updated 9 years ago
Alternatives and similar repositories for TreeWAS
Users that are interested in TreeWAS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ABLE - Approximate Blockwise Likelihood Estimation☆17Jul 4, 2018Updated 8 years ago
- ☆13Nov 30, 2018Updated 7 years ago
- Tools to convert to and from vcf format☆14Jun 21, 2017Updated 9 years ago
- R package to estimate kinship and FST from SNP data☆21Jan 27, 2026Updated 9 months ago
- ARBitR: Assembly Refinement with Barcode-identity-tagged Reads☆10Oct 22, 2020Updated 6 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Pinpoints the mutation favored by selection☆36Nov 2, 2021Updated 4 years ago
- Minimal Assumption Genomic Inference of Coalescence☆14Aug 8, 2023Updated 3 years ago
- ☆14Jul 18, 2025Updated last year
- Calculate AUC based on GWAS summary statistics only☆10Jun 29, 2018Updated 8 years ago
- Counterfactual Inference by Machine Learning and Attribution Models☆15Aug 24, 2023Updated 3 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆45Nov 13, 2019Updated 6 years ago
- Structured Linear Mixed Model is a method to test for loci that interact with multiple environments.☆15Sep 16, 2020Updated 6 years ago
- Recombination maps from Bhérer, C. et al. Nature Communications☆13Apr 25, 2017Updated 9 years ago
- simple jobs submission via command-line for AWS batch☆80May 21, 2019Updated 7 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Detecting NUMTs from WGS☆14Nov 19, 2023Updated 2 years ago
- MASI Lab Implementation of PheWAS in Python☆28Nov 12, 2024Updated last year
- Single sample network reconstruction in R☆24Apr 6, 2020Updated 6 years ago
- Population genetics analyses☆23Oct 10, 2019Updated 7 years ago
- Identifying, understanding, and correcting technical biases on the sex chromosomes in next-generation sequencing data☆23Apr 11, 2019Updated 7 years ago
- Work for the tree sequence inference paper.☆24Oct 19, 2020Updated 6 years ago
- ☆12Aug 23, 2023Updated 3 years ago
- Fast, accurate and simple to use command line tool for variant detection in NGS data.☆14Sep 3, 2019Updated 7 years ago
- Estimate linkage disequilibrium between unphased loci☆11Jun 9, 2015Updated 11 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Genomics workflows for CPG using Hail Batch☆12Sep 8, 2026Updated last month
- De novo genome assembler.☆12Jul 30, 2018Updated 8 years ago
- ☆14Jul 1, 2025Updated last year
- ☆16Apr 3, 2023Updated 3 years ago
- Valid and Powerful Machine-Learning-Assisted Genetic Association Studies☆25Sep 9, 2026Updated last month
- ☆13Apr 25, 2026Updated 6 months ago
- An R interface for the ADMIXTOOLS software☆39Oct 7, 2026Updated 3 weeks ago
- Plot CNV data with a genome viewer in R☆16Apr 5, 2017Updated 9 years ago
- Haplotype phasing software☆72Dec 5, 2020Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Scaffolding with assembly likelihood optimization☆21Dec 14, 2020Updated 5 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Apr 22, 2019Updated 7 years ago
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆18Sep 19, 2020Updated 6 years ago
- A complete tool set for molecular QTL discovery and analysis☆65Apr 16, 2024Updated 2 years ago
- Text matching UK Biobank Self-Reported medication descriptions for medication classification☆28Apr 7, 2022Updated 4 years ago
- Collection of notes and scripts related to NGS☆14Sep 2, 2026Updated last month
- Bioinformatics pipeline for the generation and analysis of the DrosEU data of 2014.☆11Nov 14, 2024Updated last year