mcveanlab / TreeWAS
☆15Updated 7 years ago
Alternatives and similar repositories for TreeWAS:
Users that are interested in TreeWAS are comparing it to the libraries listed below
- genetic correlation between phenotypes in the UK biobank☆12Updated last year
- Get SNP proxies from the 1000 Genomes Project.☆28Updated 6 years ago
- Sample code for ldsc analyses in UKBB☆30Updated last year
- ☆16Updated last year
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆33Updated 6 years ago
- R package for 'Bayesian multivariate analysis of summary statistics' (Stephens Lab)☆10Updated 4 years ago
- GWAS QC, PCA, haplotype phasing, genotype imputation☆17Updated last month
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆12Updated last year
- Canonical SGE cluster genotype imputation pipeline☆12Updated 9 years ago
- software package for integrative genetic association analysis☆34Updated last year
- Generalized linear Mixed Model Association Tests☆39Updated last year
- Interactive eQTL visualizations☆13Updated 2 years ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Updated 5 years ago
- An interactive graphical illustration of genetic associations and their biological context☆16Updated 11 months ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆33Updated 2 weeks ago
- ☆10Updated 2 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 5 months ago
- tools to efficiently retrieve and calculate LD☆33Updated 3 years ago
- ☆31Updated 3 years ago
- Phenome Exome Association and Correlation Of Key phenotypes☆28Updated 3 years ago
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆11Updated 5 years ago
- R package to perform Bayesian Genome-Wide Association Studies☆38Updated last year
- Repository for resources we'd like to share with the community.☆24Updated 2 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆28Updated 7 months ago
- Toolkit for QTL mapping and meta-analysis.