☆24May 31, 2024Updated 2 years ago
Alternatives and similar repositories for SuperPangenomeofGrapevines
Users that are interested in SuperPangenomeofGrapevines are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Generate alternative long reads with the help of target`s assemblies, target`s PacBio HiFi reads and reference genome.☆20Mar 25, 2026Updated 5 months ago
- ☆28May 12, 2026Updated 4 months ago
- A gap-closing software tool that uses long reads to enhance genome assembly.☆24Apr 25, 2024Updated 2 years ago
- Resistify is a program which rapidly identifies and classifies plant NLR and PRR genes from protein sequences. It is designed to be light…☆50Jul 22, 2026Updated last month
- A Comparative Genomics Framework Integrating Synteny Visualization☆19May 6, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This is a modified version of EDTA -- zgtools☆20Aug 26, 2026Updated 2 weeks ago
- Detailed bioinformatics scripts and methods used in the Maize-Pan-genome paper.☆17Oct 8, 2025Updated 11 months ago
- ☆24Feb 26, 2026Updated 6 months ago
- Construct and Analyze the North American Vitis pangenome☆29Aug 19, 2025Updated last year
- This repository contains all codes and scripts used in the Wild Rice Pangenome Project. The project aims to provide a comprehensive analy…☆32Apr 17, 2025Updated last year
- ☆52Jun 27, 2026Updated 2 months ago
- scripts used in Rice Pangenome Projects (Evolution).☆16Oct 29, 2023Updated 2 years ago
- ggideogram is a ggplot2 extension package for drawing chromosome diagrams☆19Nov 29, 2024Updated last year
- ☆10Sep 4, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆17Mar 2, 2024Updated 2 years ago
- We report a section-wide NLRome for the tuber-bearing section Petota, including the most important non-cereal food crop potato. Evolution…☆23Oct 31, 2025Updated 10 months ago
- The complete reference genome for grapevine (Vitis vinifera L.) genetics and breeding☆14Feb 11, 2025Updated last year
- Telomere compliment tools☆26Nov 17, 2025Updated 9 months ago
- a Semi-automated pipeline for assembling T2T genome☆29Oct 16, 2025Updated 10 months ago
- Whole genome visualization and comparative genomics in R☆25Feb 18, 2025Updated last year
- Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…☆73Oct 23, 2025Updated 10 months ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆40Oct 29, 2025Updated 10 months ago
- This is the standalone version of the EviAnn pipeline☆185Updated this week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Scripts for Shi et al. (2024). The suer-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread …☆19Apr 1, 2024Updated 2 years ago
- A fast tool for detecting and decomposing segmental duplications in genome assemblies☆60Jul 19, 2025Updated last year