NotebookOFXiaoMing / SuperPangenomeofGrapevinesLinks
☆20Updated last year
Alternatives and similar repositories for SuperPangenomeofGrapevines
Users that are interested in SuperPangenomeofGrapevines are comparing it to the libraries listed below
Sorting:
- ☆26Updated 3 years ago
- This is a method to find telomeres and centromeres in plants.☆42Updated 2 years ago
- ☆40Updated 4 months ago
- A genome assembly assessment pipeline.☆37Updated 2 years ago
- ☆21Updated last year
- Dynamic Elongation of a Genome Assembly Path☆22Updated last year
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆40Updated last week
- ☆31Updated 11 months ago
- Plant genome assembly and annotation pipeline using snakemake☆48Updated 6 months ago
- HiCAT new project☆29Updated 6 months ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆32Updated last month
- Selection outlier scan with population branch statistic☆14Updated last year
- ☆41Updated 2 years ago
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆31Updated 6 months ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 3 years ago
- a Semi-automated pipeline for assembling T2T genome☆24Updated last month
- Pan-genome Construction and Population Structure Variation Calling pipeline☆44Updated last year
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆13Updated 6 years ago
- Centromics: visualing centromeres with multiple omics data☆24Updated 9 months ago
- A tool for quick and accurate calculation of syntenic diversity.☆42Updated 2 months ago
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- use long sequenced reads to close gaps in assemblies☆39Updated 7 years ago
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆48Updated 2 months ago
- ☆28Updated 3 years ago
- BITACORA: A Bioinformatics tool for gene family annotation☆49Updated 6 months ago
- Scripts that used in our chicken T2T manuscript.☆22Updated 2 years ago
- ☆30Updated 8 months ago
- A shiny application to visualize MCscan result☆37Updated 3 years ago
- ☆44Updated last year