☆33Aug 24, 2021Updated 4 years ago
Alternatives and similar repositories for MCML
Users that are interested in MCML are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Picasso: a methods for embedding points in 2D in a way that respects distances while fitting a user-specified shape.☆73Sep 30, 2025Updated 5 months ago
- ☆16Nov 5, 2021Updated 4 years ago
- An interface for Nested Stochastic Block Model for single cell analysis☆37Sep 30, 2025Updated 5 months ago
- ESICCC: A systematic computational framework for evaluation, selection and integration of cell-cell communication inference methods☆13Jan 10, 2024Updated 2 years ago
- Consistent Clusters for scRNA-seq☆11Oct 6, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Code for reproducing results from the paper "Modular and efficient pre-processing of single-cell RNA-seq data"☆23Feb 14, 2021Updated 5 years ago
- Bulk and single-cell Multi-Omics ground truth Simulator in R☆11Feb 10, 2026Updated last month
- SpatialCorr: Identify gene sets with spatially varying correlation☆18Jan 2, 2024Updated 2 years ago
- ☆11Jun 10, 2024Updated last year
- Analysis notebooks for "SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes".☆14Nov 20, 2020Updated 5 years ago
- ☆27Sep 26, 2024Updated last year
- Pipeline to detect HLA disruption from WES and RNAseq data☆22Feb 17, 2025Updated last year
- Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long read…☆12Jan 22, 2020Updated 6 years ago
- Homebrew/science is deprecated☆11Jan 2, 2018Updated 8 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Store collections of experimental data based on TileDB☆12Mar 16, 2026Updated last week
- Genomics data re-analysis☆23Mar 19, 2026Updated last week
- Perform inference on algorithm-agnostic variable importance in Python☆21May 12, 2022Updated 3 years ago
- R package for robust clustering of single cell RNA sequencing data☆36Mar 25, 2024Updated 2 years ago
- Examples of TMT data analyses using R. Links to notebooks and repositories. Also a few spectral counting analyses.☆22May 27, 2022Updated 3 years ago
- Python code for genetic marker selection using linear programming☆42Mar 22, 2024Updated 2 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Jul 12, 2021Updated 4 years ago
- A template for Python projects using cookiecutter☆12Mar 9, 2026Updated 2 weeks ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆11Oct 23, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Fast Laplacian estimation☆16May 31, 2024Updated last year
- Package for pooling the results from (dependent) tests☆12Dec 1, 2025Updated 3 months ago
- Documentation for PEP specification and all PEPkit software☆10Updated this week
- Methods for estimating intrinsic dimension and methods for generating data on manifolds☆12May 23, 2019Updated 6 years ago
- COMET Single-Cell Marker Detection tool☆32Jun 21, 2022Updated 3 years ago
- OLD REPOSITORY - Go to☆31Feb 6, 2018Updated 8 years ago
- find clusters of different intrinsic dimension☆11Feb 16, 2024Updated 2 years ago
- ☆18Apr 10, 2015Updated 10 years ago
- ☆12Mar 1, 2026Updated 3 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- RNA-Skim: a rapid method for RNA-Seq quantification at transcript level☆19Sep 3, 2017Updated 8 years ago
- A Python3 script for removal of outlier sequences from a multiple sequence alignment (FASTA format).☆10Jan 26, 2025Updated last year
- Post hoc cell type classification of single-cell RNA-sequencing data.☆10Oct 5, 2021Updated 4 years ago
- Upgrade to coloc☆13Aug 1, 2018Updated 7 years ago
- Scalable framework for comparing metric measure spaces with up to 1M points.☆16Apr 6, 2021Updated 4 years ago
- Tutorial in practical research data management: creating simple metadata files using dataspice☆12Apr 8, 2019Updated 6 years ago
- Pan gGnome Viewer☆10Jul 10, 2025Updated 8 months ago