sc932 / ALELinks
Assembly Likelihood Estimator
☆35Updated 2 years ago
Alternatives and similar repositories for ALE
Users that are interested in ALE are comparing it to the libraries listed below
Sorting:
- Code to create a PRG from a Multiple Sequence Alignment file☆25Updated 3 months ago
- GAPPadder is tool for closing gaps on draft genomes with short sequencing data☆27Updated 8 years ago
- ☆30Updated 2 years ago
- The final version 2 release of our software to detect core genes in eukaryotic genomes☆29Updated 10 years ago
- Locus and lineage tests for bacterial GWAS☆29Updated 8 years ago
- ☆15Updated 5 years ago
- transposable element typing pipeline☆19Updated last year
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 6 years ago
- ♥ Fast and Accurate Estimation of Evolutionary Distances☆29Updated 7 months ago
- Lift-over alignments from variant-aware references☆34Updated 2 years ago
- Scaffolding with assembly likelihood optimization☆21Updated 4 years ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 7 months ago
- Improved Phased Assembler☆28Updated 3 years ago
- Find Unique genomic Regions☆32Updated last month
- ♥ Efficient Estimation of Evolutionary Distances☆47Updated last year
- Convert genbank files to a swath of other formats☆23Updated 2 years ago
- Guided synteny alignment between duplicated genomes (within specified quota constraint)☆59Updated 8 years ago
- URMAP ultra-fast read mapper☆38Updated 5 years ago
- A draft genome scaffolder that uses multiple reference genomes in a graph-based approach.☆45Updated 4 years ago
- Annotated Genome Optimization Using Transcriptome Information☆20Updated 5 years ago
- genomic alignment similarity search tool☆18Updated 6 months ago
- Fast and accurate tool for estimating genomic distances between genome-skims☆45Updated 2 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆35Updated last week
- Pan-Genomic Matching Statistics☆54Updated last year
- Scaffolding genomes using synthetic long read clouds☆20Updated 9 years ago
- MarginPolish: Graph based assembly polishing☆47Updated 5 years ago
- Haplotype-aware genome assembly toolkit☆30Updated 5 years ago
- Differential k-mer analysis☆38Updated last year