Alternatives and similar repositories for bio-data-zoo

Users that are interested in bio-data-zoo are comparing it to the libraries listed below

• shenwei356 / perfect-bioinformatic-tools
  What should perfect bioinformatic tools be like?
  ☆129Updated 3 months ago
• immunitastx / coding_exercise_TCGA_infiltration
  coding exercise using TCGA immune infiltration data
  ☆45Updated last year
• seqeralabs / nextflow-tutorial
  Nextflow training material for introductory tutorial
  ☆105Updated 3 years ago
• sheynkman-lab / Long-Read-Proteogenomics
  A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.
  ☆46Updated 2 years ago
• nf-core / differentialabundance
  Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq
  ☆81Updated last week
• GuyTeichman / RNAlysis
  Analyze your RNA sequencing data without writing a single line of code
  ☆137Updated 2 months ago
• nf-core / airrflow
  B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework
  ☆66Updated 2 weeks ago
• nf-core / configs
  Config files used to define parameters specific to compute environments at different Institutions
  ☆103Updated last week
• urmi-21 / orfipy
  Fast and flexible ORF finder
  ☆73Updated 3 years ago
• ialbert / bio
  Making bioinformatics fun again
  ☆75Updated 2 months ago
• pachterlab / seqspec
  machine-readable file format for genomic library sequence and structure
  ☆121Updated 2 weeks ago
• bionitio-team / bionitio
  Demonstrating best practices for bioinformatics command line tools
  ☆117Updated 4 years ago
• htseq / htseq
  HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.
  ☆105Updated 2 months ago
• hoelzer-lab / rnaflow
  A simple RNA-Seq differential gene expression pipeline using Nextflow
  ☆102Updated last month
• HadrienG / tutorials
  Various bioinformatics tutorials
  ☆61Updated last year
• vsbuffalo / granges
  A Rust library and command line tool for working with genomic ranges and their data.
  ☆101Updated last year
• refresh-bio / SPLASH
  ☆80Updated this week
• igvteam / igv-notebook
  Module for embedding igv.js in an IPython notebook
  ☆76Updated 6 months ago
• sib-swiss / statistics-and-machine-learning-training
  ☆28Updated 4 months ago
• enasequence / enaBrowserTools
  A collection of scripts to assist in the retrieval of data from the ENA Browser
  ☆87Updated last week
• ArcInstitute / xsra
  An efficient CLI to extract sequences from the SRA
  ☆111Updated last week
• NBISweden / workshop-reproducible-research
  NBIS/Elixir course: Tools for Reproducible Research
  ☆64Updated last month
• evanpeikon / math_for_compbio
  This repository contains math tutorials I created for Bioinformatics and Computational Biology.
  ☆91Updated 11 months ago
• melbournebioinformatics / MelBioInf_docs
  Melbourne Bioinformatics documentation in markdown format
  ☆117Updated last month
• bpucker / PythonTUBS
  Python introduction for life scientists
  ☆46Updated 3 months ago
• nf-core / fetchngs
  Pipeline to fetch metadata and raw FastQ files from public databases
  ☆178Updated 2 weeks ago
• louiejtaylor / grabseqs
  A utility for easy downloading of reads from next-gen sequencing repositories like NCBI SRA
  ☆106Updated 5 years ago
• evanpeikon / bash_fundamentals
  Introduction to Bash for bioinformatics
  ☆47Updated 11 months ago
• jsh58 / NGmerge
  Merging paired-end reads and removing adapters
  ☆45Updated 4 months ago
• nf-core / smrnaseq
  A small-RNA sequencing analysis pipeline
  ☆89Updated 2 months ago