nh2tran / DeepNovoAALinks
DeepNovo workflow of neoantigen discovery by personalized de novo sequencing.
☆12Updated 5 years ago
Alternatives and similar repositories for DeepNovoAA
Users that are interested in DeepNovoAA are comparing it to the libraries listed below
Sorting:
- Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors☆33Updated 8 months ago
- Deep proteome inference from peptide profiles☆13Updated 5 years ago
- ☆13Updated 4 years ago
- A deep learning approach for predicting high-confidence neoantigens by considering both the presentation possibilities of mutant peptides…☆43Updated 2 years ago
- ☆23Updated last week
- a Customized Proteogenomic Workflow for Neoantigen Prediction and Selection☆24Updated 3 years ago
- ☆26Updated 4 years ago
- For MHC-I protein-peptide binding predictions: Deep Learning model with CNN and Snakemake workflow☆13Updated 7 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 10 months ago
- ☆33Updated 3 years ago
- Deep learning model to predict degron sequences☆19Updated 2 years ago
- NeoDisc - A computational pipeline for the identification and prioritization of immunogenic tumor-specific HLA-I and -II antigens from ge…☆13Updated last year
- Focused multi-day workshop covering the material needed for a successful RNA-Seq experiment.☆16Updated 7 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- Snakemake workflow for neoantigen prediction☆14Updated 2 years ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆22Updated 2 years ago
- Use machine learning to design codon-optimized DNA sequences for increased protein expression.☆15Updated 3 years ago
- 🏺 Exploring novel tumor epitope identification☆37Updated 5 years ago
- ☆10Updated 4 years ago
- ☆21Updated 3 years ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆14Updated 3 years ago
- R tool to analyse and integrate multiple -omics data☆15Updated 6 months ago
- ☆16Updated 5 years ago
- Machine learning workflows for analyzing high-throughput protein data☆26Updated 9 years ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆15Updated 3 years ago
- ☆12Updated 7 years ago
- ViennaRNA Package consists of a C code library for the prediction and comparison of RNA secondary structures☆14Updated 3 years ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- A collection of useful functions for bioinformatics data analysis☆24Updated this week
- A python library for creating simulated regulatory DNA sequences☆39Updated 2 years ago