PepTools - An Immunoinformatics (Immunological Bioinformatics) R-package for working with peptide data
☆19Feb 21, 2018Updated 8 years ago
Alternatives and similar repositories for PepTools
Users that are interested in PepTools are comparing it to the libraries listed below
Sorting:
- R Shiny application "Vaccine Designer" aiming for the construction of vaccine sequences based on multi epitope design workflow.☆10Jun 25, 2024Updated last year
- ☆11Aug 3, 2023Updated 2 years ago
- 🔍 Fit3D - An application for template-based detection of small structural motifs in protein structures and macromolecular structure data…☆11Oct 16, 2018Updated 7 years ago
- When Expectations Meet Reality: Realistic Unit Testing in R☆12Jul 11, 2024Updated last year
- Lecture notes for 'Interpretable Machine Learning' at UoW. Summer semester 2020/2021☆13Jun 22, 2021Updated 4 years ago
- Auto in silico Consensus Inverse Docking(ACID) is a web server mainly for drug repurposing based on the consensus inverse docking method…☆13Aug 22, 2019Updated 6 years ago
- DeepNovo workflow of neoantigen discovery by personalized de novo sequencing.☆12Nov 26, 2020Updated 5 years ago
- PIDGINv4☆13Mar 15, 2022Updated 3 years ago
- Peptide Virtual Screening Pipeline☆12Jul 3, 2019Updated 6 years ago
- R package implementing a simple method for CD8 T cell epitope prediction by MHC class I binding for HLA and other MHC-I molecules.☆15Sep 21, 2020Updated 5 years ago
- ☆17Mar 11, 2023Updated 2 years ago
- Common molecule fragments for visualization in Avogadro☆17Feb 6, 2026Updated 3 weeks ago
- Sometimes you'll need a stylish and unique project name without compromising its meaning 😋☆18Feb 5, 2021Updated 5 years ago
- ☆14Jul 6, 2023Updated 2 years ago
- LigTMap currently supports prediction for 17 protein target classes that include 6000+ protein targets.☆16Feb 20, 2021Updated 5 years ago
- Web application for protein-ligand binding sites analysis and visualization☆16Jan 9, 2023Updated 3 years ago
- A novel approach to pose selection in protein-ligand docking based on graph theory.☆20Nov 22, 2016Updated 9 years ago
- tidy processing of biological sequences in R☆44Jan 8, 2025Updated last year
- Improved Scaffold Hopping in Ligand-based Virtual Screening Using Neural Representation Learning☆21Mar 9, 2021Updated 4 years ago
- ATTRACT program suite for macromolecular docking (protein-protein, protein-nucleic acid, protein-peptide)☆19Jul 18, 2025Updated 7 months ago
- Search spectral library with entropy similarity☆21Apr 21, 2025Updated 10 months ago
- SPRINT: Scoring PRotein INTeractions☆16Aug 11, 2020Updated 5 years ago
- ☆23May 31, 2022Updated 3 years ago
- Collects software dedicated to predicting specific properties of peptides☆66Dec 17, 2024Updated last year
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆28May 16, 2021Updated 4 years ago
- Automated framework for the curation of chemogenomics data and to develop QSAR models for virtual screening using the open-source KNIME s…☆24Apr 14, 2020Updated 5 years ago
- resource for unix and SGE beginners☆24Feb 17, 2023Updated 3 years ago
- Next-generation sequencing analysis pipelines & scrips☆10Nov 25, 2020Updated 5 years ago
- SARS-CoV-2 variant calling and consensus assembly pipeline☆26Sep 18, 2023Updated 2 years ago
- Recollection of exchanges with CRAN reviewers and maintainer☆26Sep 9, 2022Updated 3 years ago
- A Toolbox for Manipulating Biological Sequences in R☆26Sep 30, 2025Updated 5 months ago
- cime public repository☆32Jan 12, 2023Updated 3 years ago
- Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors☆34Jan 27, 2026Updated last month
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆80Apr 6, 2025Updated 10 months ago
- Features Based Conformational Clustering of MD trajectories. See details at:☆10Nov 20, 2025Updated 3 months ago
- Tensorflow implementation of Generating Focussed Molecule Libraries for Drug Discovery with Recurrent Neural Networks☆29Feb 4, 2019Updated 7 years ago
- Pharmacometric Tools for Modeling & Simulation☆32Aug 25, 2025Updated 6 months ago
- The Density Functional Theory for Electrolyte Solutions☆10Sep 13, 2022Updated 3 years ago
- ☆10Oct 9, 2024Updated last year