alexarnimueller / LSTM_peptides
Long short-term memory recurrent neural networks for learning peptide and protein sequences to later design new, similar examples.
☆72Updated last year
Alternatives and similar repositories for LSTM_peptides:
Users that are interested in LSTM_peptides are comparing it to the libraries listed below
- A Python 3 version of the protein descriptor package propy☆39Updated last year
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆54Updated 2 years ago
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆49Updated 3 years ago
- RosettaDesign using PyRosetta☆30Updated 5 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆37Updated 2 years ago
- ☆32Updated 4 years ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆34Updated 2 years ago
- Variational autoencoder for protein sequences - add metal binding sites and generate sequences for novel topologies☆82Updated last year
- PyDock Tutorial☆30Updated 6 years ago
- ☆97Updated 2 years ago
- A multiple-layer inter-molecular contact features based deep neural network for protein-ligand binding affinity prediction☆77Updated 4 years ago
- Paratope Prediction using Deep Learning☆59Updated last year
- ☆58Updated 2 months ago
- ☆29Updated 4 years ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆67Updated 5 months ago
- ☆34Updated 3 years ago
- pyFoldX: python bindings for FoldX.☆43Updated 3 years ago
- A simple Python library to generate model peptides☆80Updated 4 years ago
- Set of useful HADDOCK utility scripts☆50Updated 4 months ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- Calculation of interatomic interactions in molecular structures☆70Updated 3 years ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆24Updated 10 months ago
- Predict the binding affinity of protein-protein complexes from structural data☆115Updated 3 months ago
- Set of Python scripts designed to be a dependency-free cross-platform swiss army knife for PDB files.☆26Updated 2 years ago
- Collecting AMP MIC data from different sources, then running a GAN to output promising sequences☆66Updated 5 months ago
- ☆38Updated 4 years ago
- DLSCORE: A deep learning based scoring function for predicting protein-ligand binding affinity☆49Updated last year
- a deep learning architecture for protein-ligand binding affinity prediction☆71Updated last year
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆60Updated 5 months ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆34Updated last year