alexarnimueller / LSTM_peptidesLinks
Long short-term memory recurrent neural networks for learning peptide and protein sequences to later design new, similar examples.
☆77Updated 2 years ago
Alternatives and similar repositories for LSTM_peptides
Users that are interested in LSTM_peptides are comparing it to the libraries listed below
Sorting:
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆61Updated 8 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- Collecting AMP MIC data from different sources, then running a GAN to output promising sequences☆85Updated last year
- RosettaDesign using PyRosetta☆33Updated 6 years ago
- Paratope Prediction using Deep Learning☆61Updated 2 years ago
- DLSCORE: A deep learning based scoring function for predicting protein-ligand binding affinity☆48Updated 2 years ago
- A Python 3 version of the protein descriptor package propy☆46Updated 2 years ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆36Updated 3 years ago
- A simple Python library to generate model peptides☆88Updated 4 years ago
- A multiple-layer inter-molecular contact features based deep neural network for protein-ligand binding affinity prediction☆81Updated 5 years ago
- Machine Learning Designs Non-Hemolytic Antimicrobial Peptides☆35Updated 4 years ago
- Peptide optimization with Machine Learning☆77Updated 2 years ago
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆52Updated 8 months ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago
- Set of useful HADDOCK utility scripts☆55Updated last month
- ☆32Updated 5 years ago
- Variational autoencoder for protein sequences - add metal binding sites and generate sequences for novel topologies☆92Updated 2 years ago
- ☆35Updated 4 years ago
- An open-source library for the analysis of protein interactions.☆32Updated 3 years ago
- A package for MD, Docking and Machine learning drug discovery pipeline☆44Updated 5 years ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- PyDock Tutorial☆34Updated 7 years ago
- Calculation of interatomic interactions in molecular structures☆81Updated 3 years ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆81Updated last week
- Biosynthesis Navigator for Natural Products☆52Updated 3 years ago
- pyFoldX: python bindings for FoldX.☆51Updated 4 years ago
- Fully convolutional neural networks for protein residue-residue contact prediction☆43Updated 6 years ago
- a deep learning architecture for protein-ligand binding affinity prediction☆76Updated last year
- Predict the binding affinity of protein-protein complexes from structural data☆153Updated last month
- Code for our paper "Protein sequence design with a learned potential"☆80Updated 2 years ago