zwj-tina / GEPIA2021
☆15Updated 3 years ago
Alternatives and similar repositories for GEPIA2021
Users that are interested in GEPIA2021 are comparing it to the libraries listed below
Sorting:
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- ☆21Updated 3 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between g…☆13Updated 3 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆29Updated 2 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆25Updated 3 years ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆30Updated 3 years ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆21Updated 3 years ago
- ☆29Updated 6 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Explore the cancer relevance of your gene list☆51Updated 2 months ago
- ConsensusTME Gene Sets and R Script☆39Updated 11 months ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 3 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆18Updated last month
- ☆49Updated 9 months ago
- ☆19Updated last year
- Tools for assessing clustering robustness☆23Updated 3 weeks ago
- Algorithm for detecting alternative splicing in a population of single cells. See details in Welch et al., Nucleic Acids Research 2016: h…☆21Updated 8 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 6 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆42Updated last year
- Methods and analysis for Garcia-Nieto, et al. Somatic mutations☆15Updated 5 years ago
- Easy and comprehensive biological network reconstruction and analysis☆28Updated 7 months ago
- Harvard FAS informatics scRNAseq workshop website☆37Updated 5 years ago
- Tumour Heterogeneity and Intercellular Networks of Nasopharyngeal Carcinoma at Single Cell Resolution☆11Updated 2 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- ☆18Updated last month
- ☆20Updated last year
- Run multiple Pipeline5 instances at once☆10Updated 2 months ago
- ☆12Updated last year