zwj-tina / GEPIA2021
☆15Updated 2 years ago
Alternatives and similar repositories for GEPIA2021:
Users that are interested in GEPIA2021 are comparing it to the libraries listed below
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 4 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 6 years ago
- Expedition suite for computing, visualizing, and analyzing single-cell alternative splicing data☆11Updated 7 years ago
- A tool for large scale omics datasets evaluation☆24Updated last year
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆29Updated 2 years ago
- This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between g…☆13Updated 3 years ago
- Explore the cancer relevance of your gene list☆51Updated last month
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆16Updated 3 weeks ago
- Please consider using/contributing to https://github.com/nf-core/scdownstream☆24Updated 9 months ago
- ☆28Updated 6 years ago
- Run multiple Pipeline5 instances at once☆10Updated 3 weeks ago
- ☆14Updated 2 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- ☆46Updated 8 months ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆30Updated 2 years ago
- ☆21Updated 3 years ago
- The R Bioconductor package for scMAGeCK.☆12Updated 11 months ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆17Updated 3 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆19Updated 2 years ago
- 2019 single cell RNA sequencing Workshop @ UCD AND UCSF☆17Updated 5 years ago
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆15Updated last year
- Integrative analysis for scTCR- and scRNA-seq data☆16Updated last week
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- ☆18Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆24Updated 3 years ago
- ConsensusTME Gene Sets and R Script☆39Updated 9 months ago
- documentation for trackViewer☆29Updated 5 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆56Updated last year
- Epimap processing and analysis code repository☆33Updated 2 years ago