☆15Apr 26, 2022Updated 4 years ago
Alternatives and similar repositories for GEPIA2021
Users that are interested in GEPIA2021 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- DeepNovo workflow of neoantigen discovery by personalized de novo sequencing.☆12Nov 26, 2020Updated 5 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆30Apr 16, 2020Updated 6 years ago
- TLimmuno2: predicting MHC class II antigen immunogenicity through transfer learning☆13Jun 19, 2023Updated 3 years ago
- Scripts and Data associated with our publication on genomic signatures to discriminate LUAD and LUSC lung cancer types using TCGA data☆11Mar 2, 2022Updated 4 years ago
- Junction centric alternative splicing translator☆22May 22, 2026Updated 2 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- CWGCNA is an R package to perform causal inference from the WGCNA framework.☆20Oct 26, 2024Updated last year
- Code for the paper on the ICR immune signatures and prognostic significance pan-cancer (TCGA)☆10Jul 22, 2020Updated 6 years ago
- A collection of bioinformatics data analysis notebooks focused on providing examples of current best practices in sequencing data analysi…☆18Aug 6, 2026Updated last week
- Mapping the Functional Landscape of TCR Repertoire☆36Oct 8, 2021Updated 4 years ago
- ☆63Dec 27, 2023Updated 2 years ago
- Interactive Visual Analysis of differential gene expression test results☆22Jan 9, 2017Updated 9 years ago
- ☆14Oct 14, 2022Updated 3 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆16Dec 3, 2018Updated 7 years ago
- ☆15Dec 16, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology. https://iobr.github.…☆293Jul 23, 2026Updated 3 weeks ago
- ☆15Mar 2, 2023Updated 3 years ago
- ☆16Dec 21, 2022Updated 3 years ago
- GEO RNA-seq Experiments Processing Pipeline☆23Oct 25, 2019Updated 6 years ago
- An R package for plotting GWAS results from the GAPIT package☆14Updated this week
- ☆17May 15, 2024Updated 2 years ago
- ☆12Jun 24, 2026Updated last month
- Nextflow pipeline for Mutect2 somatic variant calling best practices☆23Jun 14, 2024Updated 2 years ago
- ☆120Nov 12, 2022Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- R package of utilities for handling paths, files and directories☆19Jan 14, 2019Updated 7 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆21Feb 8, 2020Updated 6 years ago
- DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions☆12Jul 8, 2021Updated 5 years ago
- A scalable SCENIC workflow for single-cell gene regulatory network analysis☆182Dec 8, 2022Updated 3 years ago
- Code for the paper "BIOLITMAP: a web-based geolocated and temporal visualization of the evolution of bioinformatics publications" in Oxfo…☆21May 3, 2019Updated 7 years ago
- Scalable genomic analysis pipelines, written in WDL☆12Updated this week
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆18Aug 26, 2020Updated 5 years ago
- Repository to reproduce analyses from the GTEx V6P Rare Variation Manuscript☆17Nov 13, 2017Updated 8 years ago
- EuBIC 2023 developer's meeting☆13Jan 16, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A comprehensive R package to construct interactive and reproducible biological data analysis applications based on the R platform☆56Jan 8, 2023Updated 3 years ago
- ALD study data analysis☆13Feb 16, 2023Updated 3 years ago
- An R package to convert SingeCellExperiment and Seurat objects into anndata as comprehensively as possible.☆14May 19, 2026Updated 2 months ago
- Initial recommendations for performing, benchmarking, and reporting single-cell proteomics experiments. The code is distributed under an …☆12Apr 5, 2023Updated 3 years ago
- ☆44Aug 22, 2019Updated 6 years ago
- Python library for analyzing mass spectrometry proteomics data.☆15Mar 20, 2024Updated 2 years ago
- Reference data for cell-type assignment with clustifyr☆13Nov 3, 2022Updated 3 years ago