gagneurlab / spectralisLinks
☆14Updated last year
Alternatives and similar repositories for spectralis
Users that are interested in spectralis are comparing it to the libraries listed below
Sorting:
- ☆20Updated 8 months ago
- Deep learning framework for proteomics☆132Updated 2 months ago
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆70Updated last month
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆47Updated 7 months ago
- A deep learning toolkit for mass spectrometry☆84Updated this week
- Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling☆25Updated last year
- De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model☆164Updated last week
- ☆15Updated 2 years ago
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆42Updated last year
- ☆12Updated last year
- Proteomics Mass Spectrometry Datasets for Machine Learning☆19Updated last year
- Rescoring and spectral library generation pipeline for proteomics.☆50Updated last week
- Democratizing ML in proteomics☆44Updated this week
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆29Updated last week
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆73Updated 2 years ago
- python tools for TCR:peptide-MHC modeling and analysis☆82Updated last year
- Python package for investigating the structural context of PTMs☆28Updated 10 months ago
- Evolutionary velocity with protein language models☆94Updated 2 years ago
- Python framework for Deep Learning in Proteomics☆31Updated this week
- A list of tools on proteomics using deep learning☆106Updated last year
- Paper collection about de novo peptide Sequening☆19Updated 9 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- Generator and regressor neural networks for antimicrobial peptides☆25Updated last year
- Community-curated tutorials and datasets for ML in proteomics☆55Updated last week
- Fast and flexible semi-supervised learning for peptide detection in Python☆48Updated 8 months ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆40Updated last year
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆86Updated 2 months ago
- A collection of available Python tools for Proteomics analysis☆61Updated 6 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 7 months ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆54Updated last week