gagneurlab / spectralisLinks
☆14Updated 8 months ago
Alternatives and similar repositories for spectralis
Users that are interested in spectralis are comparing it to the libraries listed below
Sorting:
- ☆20Updated 3 months ago
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆65Updated this week
- Democratizing ML in proteomics☆37Updated 2 weeks ago
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆40Updated last year
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated last month
- An open-source Python package to unify raw MS data accession and storage.☆24Updated last month
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆43Updated 2 months ago
- Python package for investigating the structural context of PTMs☆28Updated 4 months ago
- A deep learning toolkit for mass spectrometry☆77Updated 10 months ago
- Python framework for Deep Learning in Proteomics☆27Updated last month
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆46Updated this week
- Fast and flexible semi-supervised learning for peptide detection in Python☆44Updated 3 months ago
- Deep learning framework for proteomics☆127Updated last week
- ☆12Updated 11 months ago
- modular & open DIA search☆71Updated this week
- Community-curated tutorials and datasets for ML in proteomics☆54Updated 2 months ago
- Rescoring and spectral library generation pipeline for proteomics.☆43Updated last week
- The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra☆35Updated 7 months ago
- De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model☆142Updated 2 weeks ago
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆82Updated 2 months ago
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- ☆13Updated last year
- MS/MS prediction for peptides☆22Updated 4 years ago
- Proteomics Mass Spectrometry Datasets for Machine Learning☆16Updated 9 months ago
- ☆62Updated last year
- Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling☆25Updated 7 months ago
- A list of tools on proteomics using deep learning☆97Updated last year
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆56Updated last month
- ☆14Updated last year
- The Multiplierz Proteomics Library☆24Updated last year