☆17Oct 1, 2024Updated last year
Alternatives and similar repositories for spectralis
Users that are interested in spectralis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model☆201Aug 26, 2026Updated last month
- The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra☆41Jun 10, 2026Updated 3 months ago
- A deep learning toolkit for mass spectrometry☆96Aug 16, 2026Updated last month
- Collection of peptide de novo sequencing algorithms by BEAM labs☆32Sep 20, 2026Updated last week
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆45Feb 23, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆14Aug 20, 2026Updated last month
- DeepLC: Retention time prediction for peptides carrying any modification.☆80Updated this week
- GlyCombo, a combinatorial glycan composition assignment tool☆13May 4, 2026Updated 4 months ago
- DeepNovo workflow of neoantigen discovery by personalized de novo sequencing.☆12Nov 26, 2020Updated 5 years ago
- Modular and user-friendly platform for AI-assisted rescoring of peptide identifications☆66Updated this week
- ☆47Feb 27, 2026Updated 7 months ago
- Transformer deep learning model for de novo sequencing of data-independent acquisition mass spectrometry data☆36Mar 3, 2026Updated 6 months ago
- Proteomics Mass Spectrometry Datasets for Machine Learning☆23Aug 16, 2024Updated 2 years ago
- ☆11Feb 4, 2025Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Repository for Deep Learning Models for Mass Spectrometry written in Rust☆18Updated this week
- Paper collection about de novo peptide Sequening☆24Feb 5, 2025Updated last year
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆14Jul 12, 2024Updated 2 years ago
- Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling☆32Oct 15, 2024Updated last year
- ☆14Jun 26, 2026Updated 3 months ago
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆52Sep 18, 2026Updated last week
- Collisional cross-section prediction for modified and multiconformational peptides☆14Aug 26, 2026Updated last month
- catELMo: Context-Aware Amino Acid Embedding Advances Analysis of TCR-Epitope Interactions☆15Apr 10, 2025Updated last year
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆25Updated this week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- [Nature Machine Intelligence], the first open de novo sequencing and open database search rescoring deep learning model.☆46May 30, 2026Updated 3 months ago
- Pytorch implementation of DeepNovoV2, a state-of-the-art de novo peptide sequencing model.☆27May 21, 2019Updated 7 years ago
- An open-source Python package to unify raw MS data accession and storage.☆35Aug 31, 2026Updated 3 weeks ago
- This repository contains the installation zip file, user manual, example data, and source code for the PyXlinkViewer plugin for PyMOL v2☆10Jul 3, 2023Updated 3 years ago
- The Multiplierz Proteomics Library☆24Apr 27, 2024Updated 2 years ago
- HUPO-PSI mass spectrometry CV☆42Updated this week
- HLA-I ligand predictor☆47Mar 19, 2026Updated 6 months ago
- ☆15Oct 16, 2023Updated 2 years ago
- ☆13Sep 18, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Matthew The's implementation of MaRaCluster☆11Sep 21, 2026Updated last week
- Democratizing ML in proteomics☆56Sep 15, 2026Updated last week
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Aug 25, 2022Updated 4 years ago
- [NeurIPS 2024] "NovoBench: Benchmarking Deep Learning-based \emph{De Novo} Sequencing Methods in Proteomics"☆15Nov 23, 2024Updated last year
- Graph Learning of INTER-protein contacts☆11Feb 20, 2022Updated 4 years ago
- This project is created by the Hao Lab at the Department of Chemistry & Biochemistry, University of Maryland, College Park, MD. This proj…☆36Jul 3, 2026Updated 2 months ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆50Jul 13, 2026Updated 2 months ago