X-lab-3D / PANDORALinks
MODELLER-based, anchor restrained, Peptide-MHC Modelling pipeline
☆24Updated 3 months ago
Alternatives and similar repositories for PANDORA
Users that are interested in PANDORA are comparing it to the libraries listed below
Sorting:
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- scripts and facilities for in-silico mutagenesis with FoldX☆60Updated 2 months ago
- Evolutionary conservation estimation of residues or nucleotides☆47Updated 3 years ago
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆17Updated 2 years ago
- ☆23Updated 2 years ago
- Feature map and function annotation of Proteins☆33Updated last year
- ColabFold protocol☆53Updated 11 months ago
- Fast protein domain structure embedding+search tool☆25Updated 2 weeks ago
- Mutation effects predicted from sequence co-variation☆69Updated 8 years ago
- Code repository for the SPOC tool for scoring binary AF-M predicitons.☆13Updated 5 months ago
- A domain parser for Alphafold models☆40Updated last year
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆73Updated 2 years ago
- Geometric deep learning of protein–DNA binding specificity☆75Updated 6 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 6 months ago
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆42Updated last year
- a collection of colabs useful for molecular biology☆31Updated last year
- Geometry-aware protein binding site predictor☆24Updated last year
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆39Updated last year
- ☆30Updated last year
- Python package and command line tool for epitope prediction☆52Updated last year
- Conservation analysis of homologous proteins with Python☆12Updated 4 years ago
- HLA-I ligand predictor☆43Updated 2 weeks ago
- Next generation sequence parameter library for proteins☆35Updated 3 weeks ago
- ☆17Updated 2 years ago
- Long disorder consensus predictor☆17Updated last month
- ☆31Updated 3 years ago
- PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity☆20Updated last month
- Pipeline for protein-protein interaction prediction☆23Updated 3 years ago
- Python code to color a PDB structure based on parameters from a multiple sequence alignment☆32Updated 2 years ago
- ☆37Updated 3 months ago