X-lab-3D / PANDORALinks
MODELLER-based, anchor restrained, Peptide-MHC Modelling pipeline
☆21Updated 2 weeks ago
Alternatives and similar repositories for PANDORA
Users that are interested in PANDORA are comparing it to the libraries listed below
Sorting:
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆88Updated last year
- A domain parser for Alphafold models☆38Updated last year
- ColabFold protocol☆50Updated 7 months ago
- ☆30Updated 3 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆68Updated 2 years ago
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆38Updated 8 months ago
- Feature map and function annotation of Proteins☆33Updated 11 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆56Updated 5 months ago
- Geometric deep learning of protein–DNA binding specificity☆73Updated 2 months ago
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆45Updated 4 months ago
- Evolutionary conservation estimation of residues or nucleotides☆42Updated 3 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆54Updated 2 months ago
- python tools for TCR:peptide-MHC modeling and analysis☆75Updated last year
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆53Updated last year
- ☆49Updated 2 months ago
- A tool for protein and protein complex structure prediction.☆28Updated last week
- ☆41Updated 2 months ago
- Learning the language of protein-protein interactions☆72Updated last week
- https://www.nature.com/articles/s41598-020-74091-z#Tab1☆40Updated last year
- Pipeline for protein-protein interaction prediction☆23Updated 3 years ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated last year
- ☆10Updated last year
- Fast protein domain structure embedding+search tool☆21Updated 2 weeks ago
- ☆22Updated last year
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆40Updated last year
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆16Updated 2 years ago
- ☆30Updated last year
- Singularity recipe for AlphaFold☆36Updated 6 months ago
- Mutation effects predicted from sequence co-variation☆65Updated 7 years ago
- Fragment binding prediction with ColabFold☆34Updated 2 months ago