☆23May 28, 2026Updated last month
Alternatives and similar repositories for NeoantigenEditing
Users that are interested in NeoantigenEditing are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Nov 3, 2021Updated 4 years ago
- ☆13Aug 14, 2020Updated 5 years ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆26Feb 8, 2022Updated 4 years ago
- Bioinformatics pipeline for selecting patient-specific cancer neoantigen vaccines☆94Sep 15, 2025Updated 9 months ago
- R package to do enrichment analysis for neoantigens☆13Feb 21, 2022Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆28Sep 13, 2023Updated 2 years ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆91Jun 14, 2022Updated 4 years ago
- DeepNovo workflow of neoantigen discovery by personalized de novo sequencing.☆12Nov 26, 2020Updated 5 years ago
- A computational workflow for exitron splicing identification☆16Aug 30, 2024Updated last year
- ☆11May 26, 2023Updated 3 years ago
- Pipeline to detect HLA disruption from WES and RNAseq data☆23Feb 17, 2025Updated last year
- DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions☆12Jul 8, 2021Updated 4 years ago
- ☆15May 6, 2024Updated 2 years ago
- Fork of the Polysolver project☆33Nov 21, 2019Updated 6 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data☆39Nov 14, 2021Updated 4 years ago
- HLA-I ligand predictor☆46Mar 19, 2026Updated 3 months ago
- Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors☆34Jan 27, 2026Updated 5 months ago
- ☆22Apr 16, 2024Updated 2 years ago
- A Tidy Framework to Hack Gene Expression Signatures☆21Apr 20, 2025Updated last year
- NeoDisc - A computational pipeline for the identification and prioritization of immunogenic tumor-specific HLA-I and -II antigens from ge…☆14Oct 8, 2024Updated last year
- Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq☆23Apr 16, 2026Updated 2 months ago
- A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data☆21May 24, 2021Updated 5 years ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆23Feb 17, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Codes and Data for FFPEsig manuscript☆17Jan 17, 2024Updated 2 years ago
- CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…☆20Jan 17, 2020Updated 6 years ago
- Single-Cell Inference of Class Switch Recombination☆23Jun 19, 2026Updated last week
- Single-cell Transposable Element Locus Level Analysis of scRNA Sequencing☆24Oct 28, 2025Updated 8 months ago
- ☆38Apr 29, 2026Updated 2 months ago
- PRedictor of IMmunogenic Epitopes☆33Sep 24, 2025Updated 9 months ago
- VirusScan Pipeline☆12Feb 7, 2026Updated 4 months ago
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆23Nov 16, 2020Updated 5 years ago
- ☆86Apr 17, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- VariantToolChest (VTC) is intended to be a powerful tool chest to analyze VCF files. I encourage anyone to contribute their tools and hel…☆25Apr 8, 2016Updated 10 years ago
- Snakemake workflow for neoantigen prediction☆15Sep 7, 2023Updated 2 years ago
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆80Jun 5, 2026Updated 3 weeks ago
- Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution☆14May 4, 2022Updated 4 years ago
- A novel PSSM based software for predicting class I peptide-HLA binding affinity☆16Feb 24, 2017Updated 9 years ago
- An R package for analyzing high-dimensional cytometry data using the tidyverse.☆20Aug 25, 2024Updated last year
- Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.☆118Sep 2, 2024Updated last year