Torrent Mapping Alignment Program
☆20Mar 2, 2013Updated 13 years ago
Alternatives and similar repositories for TMAP
Users that are interested in TMAP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Modified or extracted from other programs☆15Dec 14, 2011Updated 14 years ago
- A Python interface to the BEDTools API using Cython☆28Mar 16, 2011Updated 15 years ago
- Pipeline to generate variant catalogues, a list of variants and their frequencies in a population, from whole genome sequences.☆14Updated this week
- a tool for processing .bed and .vcf files☆21Apr 25, 2017Updated 9 years ago
- ☆11Sep 7, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Coronavirus (SARS-Cov-2) sequencing analysis☆10Oct 5, 2021Updated 5 years ago
- This is *NOT* the official repository of samtools.☆49Jun 9, 2017Updated 9 years ago
- The python binding for D4 format☆16Oct 22, 2021Updated 4 years ago
- perform genotype-phenotype-association tests on a VCF with logistic regression.☆20Dec 15, 2015Updated 10 years ago
- de novo sequence assembler using string graphs☆244Aug 8, 2019Updated 7 years ago
- Hidden Markov Model based Copy number caller☆20Jul 18, 2026Updated 2 months ago
- Utilities for Samtools ( http://samtools.sourceforge.net/ )☆18Sep 26, 2011Updated 15 years ago
- A C++ header-only library for reading Oxford Nanopore Fast5 files☆53Jun 27, 2022Updated 4 years ago
- A WGS de novo assembler based on the FMD-index for large genomes☆74Dec 6, 2013Updated 12 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- GWAS SNP Regulatory Analysis Tool☆17Mar 19, 2015Updated 11 years ago
- ☆15Sep 22, 2026Updated 2 weeks ago
- A demo of the Python C API for CodeMonkeys☆20Jun 17, 2018Updated 8 years ago
- Snakemake with pytest example☆11Jul 18, 2020Updated 6 years ago
- BED QC tool (in the making)☆18Aug 19, 2022Updated 4 years ago
- Generic pipeline system☆23Jul 20, 2018Updated 8 years ago
- ☆17Jan 6, 2023Updated 3 years ago
- A simple tool for bulk adding/updating/removing tags from AWS resources.☆13Jan 8, 2016Updated 10 years ago
- HiFi error modeler and simulator with ploidy☆12Feb 12, 2026Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Implicit Interval Tree with Interpolation Index☆43Jul 13, 2022Updated 4 years ago
- normalize, left-align, trim, validate and clean VCF files☆20Jul 22, 2015Updated 11 years ago
- Stupid Simple Elastic Compute Cloud☆15Dec 7, 2023Updated 2 years ago
- Wavefront alignment algorithm (WFA) in Golang☆33Aug 21, 2026Updated last month
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- Python language bindings for bwa☆12Jul 19, 2026Updated 2 months ago
- Flexible genotype query among 30,000+ samples whole-genome☆95Sep 4, 2019Updated 7 years ago
- vcf file manipulation☆22Jul 9, 2015Updated 11 years ago
- Quality of life improvements for Bioinformatics in Python.☆35Sep 15, 2026Updated 3 weeks ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- program for haplotype phasing from sequence reads and related tools☆25Nov 29, 2018Updated 7 years ago
- A comprehensive analysis tool for Ribo-seq and small RNA-seq data☆10Jun 22, 2020Updated 6 years ago
- Tools for producing pseudo-cgh of next-generation sequencing data☆18Sep 5, 2016Updated 10 years ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆19Apr 2, 2020Updated 6 years ago
- A Variant Call Format reader for Python.☆76Apr 19, 2015Updated 11 years ago
- Burrows-Wheeler Transform and FM-index in golang☆21Apr 7, 2023Updated 3 years ago
- Distributed version restore tool for S3☆12Jan 5, 2015Updated 11 years ago