Alternatives and similar repositories for probabilistic-collections-rs

Users that are interested in probabilistic-collections-rs are comparing it to the libraries listed below

• Daniel-Liu-c0deb0t / dlb-kmer-sampling
  Optimal distance lower bound k-mer sampling.
  ☆12Updated last year
• nlhepler / spoa-rs
  A rust wrapper for the spoa C++ partial order alignment library
  ☆10Updated last week
• 38 / grass
  ☆21Updated 2 years ago
• pjedge / rust-spoa
  Rust crate with bindings and interface to the SPOA library for generating consensus sequences.
  ☆12Updated 6 years ago
• ratschlab / Project2020-seq-tensor-sketching
  ☆8Updated 3 years ago
• lukaslueg / hyperminhash
  ☆14Updated last year
• Daniel-Liu-c0deb0t / simple-saca
  Hardware go brrr bounded context suffix array construction algorithm
  ☆18Updated last year
• COMBINE-lab / piscem-infer
  ☆14Updated last year
• jeizenga / wfalm
  Refinements of the WFA alignment algorithm with better complexity
  ☆26Updated 3 years ago
• COMBINE-lab / mazu
  A Rust library for building modular, fast and compact indexes over genomic data
  ☆13Updated last year
• rchikhi / rust-alignbench
  Pairwise nucleotide alignment benchmark of Rust bindings
  ☆31Updated last year
• rust-seq / minimizer-iter
  Iterate over minimizers of a DNA sequence
  ☆29Updated 11 months ago
• dib-lab / MQF
  ☆13Updated last year
• TravisWheelerLab / sufr
  Parallel Construction of Suffix Arrays in Rust
  ☆23Updated last month
• Singular-Genomics / singular-demux
  Singular Genomics Demultiplexing Tool
  ☆16Updated last year
• cschin / wavefront-aln
  A "Navie" Implementation of the Wavefront Algorithm For Sequence Alignment with Gap-Affine Scoring
  ☆15Updated last year
• bacpop / sketchlib.rust
  Fast sequence distance estimates
  ☆11Updated last week
• jltsiren / simple-sds
  Simple succinct data structures (in Rust)
  ☆50Updated 6 months ago
• mkirsche / sapling
  SAPLING: Suffix Array Piecewise Linear INdex for Genomics
  ☆25Updated 4 years ago
• nkkarpov / editdistancek
  LMS algorithm for computing edit distance with SIMD optimizations
  ☆11Updated last year
• oxli-bio / oxli
  k-mers and the like
  ☆22Updated last week
• natir / nuc2bit
  ☆14Updated 4 years ago
• rchikhi / rust-seq2kminmers
  Iterate k-min-mers from a DNA sequence in Rust
  ☆13Updated last year
• pangenome / gfagino
  your friendly pangenome graph genotyper
  ☆10Updated 2 years ago
• RagnarGrootKoerkamp / minimizers
  Reference implementations of minimizer schemes to go with the mod-minimizers paper.
  ☆24Updated last month
• Kingsford-Group / miniception
  ☆14Updated 5 years ago
• prophyle / prophasm
  ProphAsm – a rapid computation of simplitigs directly from k-mer sets
  ☆26Updated 2 years ago
• COMBINE-lab / kmers
  A bit-packed k-mer representation (and relevant utilities) for rust
  ☆48Updated 11 months ago
• ocxtal / dozeu
  SIMD-parallel BLAST X-drop DP on sequence graphs
  ☆25Updated last year
• pairwise-alignment / pa-bench
  Benchmarking pairwise aligners
  ☆36Updated 4 months ago