quinlan-lab / mendelianerrorLinks
probability of mendelian error in trios.
☆11Updated 9 years ago
Alternatives and similar repositories for mendelianerror
Users that are interested in mendelianerror are comparing it to the libraries listed below
Sorting:
- Stupid Simple Structural Variant View☆25Updated 9 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated last year
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated last month
- create a gemini-compatible database from a VCF☆55Updated 5 years ago
- vgraph is a command line application and Python library to compare genetic variants using variant graphs. ``vgraph`` utilizes a graph re…☆43Updated 4 years ago
- ☆36Updated 5 years ago
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Updated 9 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 5 years ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 5 years ago
- Load numpy arrays and HDF5 files from VCF (variant call format)☆31Updated 8 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- normalize, left-align, trim, validate and clean VCF files☆20Updated 10 years ago
- python wrapper to dpryan79's bigwig library using cffi☆19Updated 9 years ago
- sort genomic data☆36Updated 2 months ago
- Variant caller GUI + genetic disease analysis☆22Updated 5 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated 2 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆30Updated 4 years ago
- robust matching of small variant datasets using flexible scoring schemes☆11Updated 5 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 6 years ago
- A tool for Read Multi-Mapper Resolution☆24Updated 8 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 7 months ago
- conda recipes for genomic data☆84Updated 4 years ago
- A tool to benchmark mappers and different parameters within minutes☆44Updated 6 years ago
- Browser based application for viewing bam alignments☆56Updated 9 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Updated 3 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 6 years ago
- The integrated pipeline for Indel detection☆17Updated 7 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆25Updated 9 years ago