quinlan-lab / mendelianerrorLinks
probability of mendelian error in trios.
☆11Updated 9 years ago
Alternatives and similar repositories for mendelianerror
Users that are interested in mendelianerror are comparing it to the libraries listed below
Sorting:
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 8 months ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- create a gemini-compatible database from a VCF☆56Updated 4 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆51Updated 8 months ago
- vgraph is a command line application and Python library to compare genetic variants using variant graphs. ``vgraph`` utilizes a graph re…☆43Updated 3 years ago
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Updated 9 years ago
- ☆37Updated 5 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆29Updated 4 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- normalize, left-align, trim, validate and clean VCF files☆20Updated 10 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- ☆16Updated 8 years ago
- Load numpy arrays and HDF5 files from VCF (variant call format)☆31Updated 8 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 5 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated last year
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago
- Variant caller GUI + genetic disease analysis☆22Updated 5 years ago
- Reference-free variant discovery in large eukaryotic genomes☆41Updated 4 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 3 months ago
- python wrapper to dpryan79's bigwig library using cffi☆19Updated 9 years ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 4 years ago
- A tool for Read Multi-Mapper Resolution☆23Updated 8 years ago
- Analysis toolkit and programming library for k-mer profiles☆31Updated 4 years ago
- Population Reference Graphs for the HLA and MHC.☆35Updated 6 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆22Updated 3 years ago
- Enriched Domain Detector for ChIP-seq data☆16Updated 3 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- conda recipes for genomic data☆85Updated 4 years ago
- JHU EN.600.649: Computational Genomics: Applied Comparative Genomics☆58Updated 7 years ago
- Prioritize structural variants based on CADD scores☆29Updated 5 years ago