jeromekelleher / python-c-api-demo
A demo of the Python C API for CodeMonkeys
☆20Updated 6 years ago
Alternatives and similar repositories for python-c-api-demo:
Users that are interested in python-c-api-demo are comparing it to the libraries listed below
- Color DNA/RNA bases in terminal output☆20Updated 7 years ago
- A utility for splitting mixed origin NGS reads☆10Updated 3 years ago
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Updated 6 years ago
- Lossless VCF compression☆18Updated 3 years ago
- Classify sequencing reads using MinHash.☆48Updated 4 years ago
- ☆22Updated 8 years ago
- ☆18Updated 9 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- R package to quickly obtain count vectors from indexed bam files☆15Updated 3 years ago
- Ebola virus surveillance☆16Updated 8 years ago
- A FASTQ quality assessment tool☆14Updated 2 years ago
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 8 years ago
- ☆15Updated last week
- Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment☆21Updated last week
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 3 years ago
- Fast but inaccurate adapter trimmer for Illumina reads☆14Updated 3 years ago
- ☆19Updated 8 years ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated last month
- variant discovery and annotation using GATK and Ensembl☆17Updated 11 years ago
- ☆22Updated 3 months ago
- Accurate and fast taxonomic classification using pseudoaligning☆21Updated 7 years ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11Updated 3 years ago
- Library of snakemake rules.☆12Updated 6 years ago
- Exploration of controlled loss of quality values for compressing CRAM files☆34Updated 2 years ago
- Data management of large-scale whole-genome sequence variant calls using GDS files (Development version only)☆45Updated last week
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 6 years ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 6 years ago
- Flexible omics pipeline☆18Updated 8 months ago