☆44Nov 26, 2025Updated 8 months ago
Alternatives and similar repositories for MEBOCOST
Users that are interested in MEBOCOST are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆65Mar 23, 2026Updated 4 months ago
- A python-based package and software to predict metabolite mediated cell-cell communications by single-cell RNA-seq data☆84Jul 25, 2025Updated last year
- An eXplainable Cell-specific machine learning method to predict clinical Phenotypes using single-cell multi-omics☆17Sep 23, 2025Updated 10 months ago
- ☆46May 4, 2024Updated 2 years ago
- ☆61Aug 6, 2025Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆21Mar 4, 2024Updated 2 years ago
- ☆25Oct 31, 2024Updated last year
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆27Feb 22, 2025Updated last year
- SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations☆23Jul 30, 2026Updated 2 weeks ago
- Extracellular vesicle-derived miRNA-mediated cell-cell communication inference for single-cell transcriptomic data☆18Apr 15, 2025Updated last year
- single cell Flux Estimation Analysis (scFEA)☆155Nov 10, 2023Updated 2 years ago
- Spatially-aware quality control for spatial transcriptomics☆16Oct 22, 2025Updated 9 months ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆22Mar 25, 2026Updated 4 months ago
- a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution☆55Aug 11, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆157Mar 20, 2026Updated 4 months ago
- An R library for conducting analyses on COMPASS data.☆18Jun 10, 2021Updated 5 years ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆23May 13, 2026Updated 3 months ago
- R package for pathway analysis in scRNA-seq data☆82Aug 17, 2024Updated last year
- ☆143Jun 25, 2026Updated last month
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆31Aug 16, 2021Updated 4 years ago
- Gene Set Scoring on the Nearest Neighbor Graph (gssnng) for Single Cell RNA-seq (scRNA-seq) using AnnData h5ad files.☆12Oct 1, 2024Updated last year
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated 4 months ago
- ☆90Jun 29, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code repository for TCAT analyses☆16Sep 26, 2025Updated 10 months ago
- Vignettes for Cardinal3 paper☆10Feb 20, 2023Updated 3 years ago
- CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.☆264Jul 8, 2026Updated last month
- Quantifying metabolism activity at the single-cell resolution☆191Feb 18, 2026Updated 5 months ago
- Code and example data for running Consensus Non-negative Matrix Factorization on single-cell RNA-Seq data☆463Apr 11, 2026Updated 4 months ago
- Nextflow implementation of scAutoQC pipeline☆12Jul 9, 2026Updated last month
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- SenePy is a set of tools to score single-cells based on their expression of cell-specific senescence markers. Please see the following pu…☆59Jan 30, 2025Updated last year
- A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…☆77Oct 16, 2025Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- CytoSPACE: Optimal mapping of scRNA-seq data to spatial transcriptomics data☆152Feb 20, 2025Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆90Jul 28, 2026Updated 2 weeks ago
- ☆10Jul 9, 2024Updated 2 years ago
- Cellsnake tool main repo☆35Feb 22, 2024Updated 2 years ago
- analysis scripts related to Jin et al manuscript on scRNA seq in aging mouse brain☆25Jun 14, 2024Updated 2 years ago
- R package for Protein activity analysis of single-cell RNAseq.☆86Jun 17, 2026Updated last month
- ☆59Jan 2, 2024Updated 2 years ago